Gene Pfl01_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3092 
Symbol 
ID3712779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3540608 
End bp3541456 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_348821 
Protein GI77459314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.559619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCC GACCTTCCTT GTTCAAAGCG TGTGTTTTTG TTCTCGCGGC TTCGTCCGCT 
GTCATGGGTA TCGCCCAGGC GGCTGACAGC AAGCTCGACA GCGTCCTGGC CCGTGGAAAA
CTGATTGTGG GGACCGGCAG CACCAATGCG CCGTGGCACT TCCAGGGCGC GGACGGCAAG
TTGCAGGGCT TTGATATCGA CATTGCCCGG ATGGTGGCCA AAGGTCTGTT CAATGACCCG
AGCAAAGTCG AGTTCGTAGT GCAGTCGTCC GATGCGCGGA TTCCCAATCT GTTGACTGAC
AAAGTCGACA TGAGCTGTCA GTTCATCACC GTCACCGCCA GCCGTGCGCA GCAAGTGGCG
TTCACCCTGC CGTACTACCG CGAAGGCGTC GGCCTGTTGC TGCCGAACAA CAGCAAGTAC
AAGGAAATCG AAGACCTGCA GGCCGGTGGT GACGGCGTGA CCGTAGCCGT GCTGCAGAAC
GTGTACGCCG AAGAGCTGGT GCATCAGGCG CTGCCCAAGG CCAAGGTCGA TCAGTACGAC
AGCGTCGATC TGATGTACCA GGCCGTTAAC TCCGGTCGCG CCGATGCCGC TGCGACCGAT
CAGTCTTCGG TCAAATACCT GATGGTGCAG AACCCTGGCC GCTATCGCAG CCCGACGTAT
GCCTGGAGCC CGCAGACCTA CGCCTGCGCC GTCAAACGCG GCGATCAGGA CTGGCTGAAC
TTCGTCAACA CCGCCCTGCA TGAAGCCATG ACCGGCGTCG AGTTCCCGAC TTATGCCGCG
TCGTTCAAGC AATGGTTCGG CGTGGATCTG CCATCGCCTG CCATCGGTTT CCCTGTCGAA
TTCAAATGA
 
Protein sequence
MHRRPSLFKA CVFVLAASSA VMGIAQAADS KLDSVLARGK LIVGTGSTNA PWHFQGADGK 
LQGFDIDIAR MVAKGLFNDP SKVEFVVQSS DARIPNLLTD KVDMSCQFIT VTASRAQQVA
FTLPYYREGV GLLLPNNSKY KEIEDLQAGG DGVTVAVLQN VYAEELVHQA LPKAKVDQYD
SVDLMYQAVN SGRADAAATD QSSVKYLMVQ NPGRYRSPTY AWSPQTYACA VKRGDQDWLN
FVNTALHEAM TGVEFPTYAA SFKQWFGVDL PSPAIGFPVE FK