Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3092 |
Symbol | |
ID | 3712779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3540608 |
End bp | 3541456 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_348821 |
Protein GI | 77459314 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.559619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCC GACCTTCCTT GTTCAAAGCG TGTGTTTTTG TTCTCGCGGC TTCGTCCGCT GTCATGGGTA TCGCCCAGGC GGCTGACAGC AAGCTCGACA GCGTCCTGGC CCGTGGAAAA CTGATTGTGG GGACCGGCAG CACCAATGCG CCGTGGCACT TCCAGGGCGC GGACGGCAAG TTGCAGGGCT TTGATATCGA CATTGCCCGG ATGGTGGCCA AAGGTCTGTT CAATGACCCG AGCAAAGTCG AGTTCGTAGT GCAGTCGTCC GATGCGCGGA TTCCCAATCT GTTGACTGAC AAAGTCGACA TGAGCTGTCA GTTCATCACC GTCACCGCCA GCCGTGCGCA GCAAGTGGCG TTCACCCTGC CGTACTACCG CGAAGGCGTC GGCCTGTTGC TGCCGAACAA CAGCAAGTAC AAGGAAATCG AAGACCTGCA GGCCGGTGGT GACGGCGTGA CCGTAGCCGT GCTGCAGAAC GTGTACGCCG AAGAGCTGGT GCATCAGGCG CTGCCCAAGG CCAAGGTCGA TCAGTACGAC AGCGTCGATC TGATGTACCA GGCCGTTAAC TCCGGTCGCG CCGATGCCGC TGCGACCGAT CAGTCTTCGG TCAAATACCT GATGGTGCAG AACCCTGGCC GCTATCGCAG CCCGACGTAT GCCTGGAGCC CGCAGACCTA CGCCTGCGCC GTCAAACGCG GCGATCAGGA CTGGCTGAAC TTCGTCAACA CCGCCCTGCA TGAAGCCATG ACCGGCGTCG AGTTCCCGAC TTATGCCGCG TCGTTCAAGC AATGGTTCGG CGTGGATCTG CCATCGCCTG CCATCGGTTT CCCTGTCGAA TTCAAATGA
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Protein sequence | MHRRPSLFKA CVFVLAASSA VMGIAQAADS KLDSVLARGK LIVGTGSTNA PWHFQGADGK LQGFDIDIAR MVAKGLFNDP SKVEFVVQSS DARIPNLLTD KVDMSCQFIT VTASRAQQVA FTLPYYREGV GLLLPNNSKY KEIEDLQAGG DGVTVAVLQN VYAEELVHQA LPKAKVDQYD SVDLMYQAVN SGRADAAATD QSSVKYLMVQ NPGRYRSPTY AWSPQTYACA VKRGDQDWLN FVNTALHEAM TGVEFPTYAA SFKQWFGVDL PSPAIGFPVE FK
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