Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3089 |
Symbol | |
ID | 3712776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3538428 |
End bp | 3539225 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_348818 |
Protein GI | 77459311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.280473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG CTCAAGTTTC CAACGTCCAG AACGGTCAGC CCTTGCTGGA CATCCGTGGC CTGCACAAGC AATACGGCGC GGTCGAAGTG CTCAAAGGCG TCGACCTGAG CATGCAGCGC GGCAACGTGG TGACGCTGAT CGGCTCCAGC GGTTCGGGCA AGACCACGCT GCTGCGCTGC GTGAACATGC TCGAGGAATT CCAGGGCGGG CAGATCCTGC TCGATGGTGA ATCCATCGGT TATGACGAAC TCAACGGCAA GCGCGTGCGT CACCCGGAAA AAGTCATCGC CCGTCATCGC GCGATGACCG GCATGGCGTT TCAGCAATTC AACCTGTTCC CGCATCTCAC CGCGTTGCAA AACGTCACGC TCGGCCTGCT GAAAGTCAAA AAGATGCACA AGGACGAAGC CGTGGCCCTG GCCGAAAAAT GGCTGGAACG GGTCGGCCTG CTGGAGCGGC GCAATCACTT TCCCGGTCAG TTGTCCGGCG GTCAGCAACA GCGCGTGGCG ATTGCCCGGG CGATTGCGAT GAACCCTAGC CTGATGCTGT TCGACGAAGT CACTTCGGCC CTCGATCCGG AACTGGTCGG CGAAGTGCTG AACGTGATCA AAGGCCTGGC CGAGGACGGC ATGACCATGT TGCTGGTGAC CCACGAAATG CGTTTTGCCT TCGAGGTCTC GGACAAGATC GTTTTCATGA ATCAGGGGCG CATCGAAGAG CAGGGGCCTC CCAAGGAACT GTTCGAGCGT CCGCAATCGC CGCGGCTGGC GGAATTTCTC AAAAGCACGC GGTTCTGA
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Protein sequence | MTQAQVSNVQ NGQPLLDIRG LHKQYGAVEV LKGVDLSMQR GNVVTLIGSS GSGKTTLLRC VNMLEEFQGG QILLDGESIG YDELNGKRVR HPEKVIARHR AMTGMAFQQF NLFPHLTALQ NVTLGLLKVK KMHKDEAVAL AEKWLERVGL LERRNHFPGQ LSGGQQQRVA IARAIAMNPS LMLFDEVTSA LDPELVGEVL NVIKGLAEDG MTMLLVTHEM RFAFEVSDKI VFMNQGRIEE QGPPKELFER PQSPRLAEFL KSTRF
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