Gene Pfl01_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3089 
Symbol 
ID3712776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3538428 
End bp3539225 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_348818 
Protein GI77459311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.280473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CTCAAGTTTC CAACGTCCAG AACGGTCAGC CCTTGCTGGA CATCCGTGGC 
CTGCACAAGC AATACGGCGC GGTCGAAGTG CTCAAAGGCG TCGACCTGAG CATGCAGCGC
GGCAACGTGG TGACGCTGAT CGGCTCCAGC GGTTCGGGCA AGACCACGCT GCTGCGCTGC
GTGAACATGC TCGAGGAATT CCAGGGCGGG CAGATCCTGC TCGATGGTGA ATCCATCGGT
TATGACGAAC TCAACGGCAA GCGCGTGCGT CACCCGGAAA AAGTCATCGC CCGTCATCGC
GCGATGACCG GCATGGCGTT TCAGCAATTC AACCTGTTCC CGCATCTCAC CGCGTTGCAA
AACGTCACGC TCGGCCTGCT GAAAGTCAAA AAGATGCACA AGGACGAAGC CGTGGCCCTG
GCCGAAAAAT GGCTGGAACG GGTCGGCCTG CTGGAGCGGC GCAATCACTT TCCCGGTCAG
TTGTCCGGCG GTCAGCAACA GCGCGTGGCG ATTGCCCGGG CGATTGCGAT GAACCCTAGC
CTGATGCTGT TCGACGAAGT CACTTCGGCC CTCGATCCGG AACTGGTCGG CGAAGTGCTG
AACGTGATCA AAGGCCTGGC CGAGGACGGC ATGACCATGT TGCTGGTGAC CCACGAAATG
CGTTTTGCCT TCGAGGTCTC GGACAAGATC GTTTTCATGA ATCAGGGGCG CATCGAAGAG
CAGGGGCCTC CCAAGGAACT GTTCGAGCGT CCGCAATCGC CGCGGCTGGC GGAATTTCTC
AAAAGCACGC GGTTCTGA
 
Protein sequence
MTQAQVSNVQ NGQPLLDIRG LHKQYGAVEV LKGVDLSMQR GNVVTLIGSS GSGKTTLLRC 
VNMLEEFQGG QILLDGESIG YDELNGKRVR HPEKVIARHR AMTGMAFQQF NLFPHLTALQ
NVTLGLLKVK KMHKDEAVAL AEKWLERVGL LERRNHFPGQ LSGGQQQRVA IARAIAMNPS
LMLFDEVTSA LDPELVGEVL NVIKGLAEDG MTMLLVTHEM RFAFEVSDKI VFMNQGRIEE
QGPPKELFER PQSPRLAEFL KSTRF