Gene Pfl01_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3086 
Symbol 
ID3712773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3535740 
End bp3536960 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348815 
Protein GI77459308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.26629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG CCAACAACAC TGCTGCCGTG GAAAAGGGCG ATGCTGCCCT CGGCGCGCAA 
CTGGTGCGTG ACATCAGCCT GCCGGCGCTG GTGCTGCACC GTGAAGCGCT GGAACACAAC
ATCCGCTGGA TGCAGAAGTT CGTCAGCGAC AGCGGCGCCG AACTCGCGCC CCACGGCAAG
ACCAGCATGA CCCCGGCGCT GTTTCGTCGT CAGCTCGACG CCGGCGCGTG GGGCATCACC
CTGGCCAGCG CCACCCAGAC CCGAGCTGCT TACGCCCACG GCGTGCGCCG GGTGTTGATG
GCCAACCAAC TGGTCGGTAC GCCGAACATG GCGCTGATTG CCGATCTGCT GGCGGCCGAT
TCCGGCTTCG ATTTCTATTG CATGGTCGAT CACCCGGACA ACGTCGCCGA TCTGGGCGCT
TATTTCGCAT CGCGCGGTGT GCGTCTGAAC GTGATGATCG AATACGGCGT GGTCGGCGGC
CGTTGCGGTT GCCGCAGCGA GCAGGAAGTC ATTGAACTGG CCAAGGCTAT CGGTACGCAA
CCGGCGCTGG CCTTGACCGG TATCGAAGGT TACGAAGGCG TGATCCATGG CGATCACGCC
GTCAGCGGCA TCCGTGAATT CGCGGCTTCG CTGGTACGCC TGGCCGTGCA GTTGCAGGAC
AGCGGCGCAT TCGCCATTGC CAAGCCGATC ATCACTGCGT CGGGTTCGGC GTGGTACGAC
CTGATTGCCG AATCGTTCGA AGCGCAGAAC GCTGGCGGGC GTTTCCTCAG CGTGCTGCGT
CCCGGCAGTT ACGTGGCTCA CGACCATGGC ATCTATAAGG AGGCGCAGTG CTGCGTGCTC
GATCGTCGCA GTGACCTGCA CGAAGGGCTG CGTCCGGCGC TGGAGGTCTG GGCCCACGTG
CAGTCGCTGC CGGAGCCGGG CTTCGCGGTG ATTGCCCTGG GCAAGCGTGA CGTGGCGTTC
GATGCCGGGA TGCCGGTGCC GCTGCTGCGT TACAAGGCCG GCGTGCTGCC GGCGGTGGGC
GACGATGTCG GCGCCTGCAA GGTGACGGCG GTGATGGACC AGCACGCGTT CATGACCGTG
GCGCCGGGCG TGGAGTTGCG CGTGGGCGAC ATCATTTCCT TCGGCACTTC GCACCCATGC
CTGACCTTCG ACAAGTGGCG CGTGGGGCTG CTGGTGGACG AGCAACTGTC GGTGATCGAA
ACCATGGAAA CCTGTTTCTG A
 
Protein sequence
MTTANNTAAV EKGDAALGAQ LVRDISLPAL VLHREALEHN IRWMQKFVSD SGAELAPHGK 
TSMTPALFRR QLDAGAWGIT LASATQTRAA YAHGVRRVLM ANQLVGTPNM ALIADLLAAD
SGFDFYCMVD HPDNVADLGA YFASRGVRLN VMIEYGVVGG RCGCRSEQEV IELAKAIGTQ
PALALTGIEG YEGVIHGDHA VSGIREFAAS LVRLAVQLQD SGAFAIAKPI ITASGSAWYD
LIAESFEAQN AGGRFLSVLR PGSYVAHDHG IYKEAQCCVL DRRSDLHEGL RPALEVWAHV
QSLPEPGFAV IALGKRDVAF DAGMPVPLLR YKAGVLPAVG DDVGACKVTA VMDQHAFMTV
APGVELRVGD IISFGTSHPC LTFDKWRVGL LVDEQLSVIE TMETCF