| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3080 |
|---|
| Symbol | |
|---|
| ID | 3712767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3524719 |
|---|
| End bp | 3526674 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | acetoacetyl-CoA synthetase |
|---|
| Protein accession | YP_348809 |
|---|
| Protein GI | 77459302 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA TTCTCTGGCA GCCCGATGCC AAACGCATTG CCCGGTCCCG CATGGACGGC
TTTCGGCGCT TCATCAATCA GCGCCACCAC CTGAAGCTCG ACGACTACCC TGCGCTGCAC
CAATGGTCCA TCGACCAGCG CGAAGCGTTC TGGCAAGCGA TCGTGGATTT CTTCGGCATC
AGTTTTCACA CCCAACCGGA CGCCGTTCTG CGCGGAGGCC TGAAAATGCC GGGTGCCGAG
TGGTTTCCCG GTGCCACCCT GAACTTCGCC GAGCATCTGC TTAGCCGACG CGACGATGCC
ATCGCCGTGA TCGCTATCGG GGAAAACGGC CAGCGTGAAC TGCTGACCTG GGCCGAGCTG
GCCCAGCAAG TCGCCGGGTT CCAGGCCAGC CTGCAAGCGG CCGGCGTGTT GGTTGGCGAC
CGGATTGCGG CCTGCATGCC CAACACCTGG CAAACCCTGG TGGCGATGCT CGCGACCACC
AGTCTCGGGG CAATCTGGTC ATGCTCCTCG CCGGACTTCG GCACCCACGG CGTGATCGAC
CGCTTCGGCC AGATCGAACC GAAGGTGCTG ATCACCTGCG CCGGCTACCG TTACGCTGGC
AAGGAGATCG ACCAGACCGT CAAGGTCAAT GAAATCCTCG AACAGCTGCC GTCACTGCAA
CAGCTGATCA TCGTGCCCTA CGCGCGACCT CAAGCCCATG CCACGGATTA CCGGACACCC
GCCAACGTCA CGCTGTGGGA CGACTTCTAC GAACCGGGCG ATGAGCCGCA ATTCGTCCCG
GTGCCGTTCG ATCATCCGCT GTACGTGCTT TATTCCAGCG GCACCACCGG CGTGCCGAAG
TGCATCGTGC ACAGCACCGG CGGCGTGCTG CTGCAACACG TCAAGGAGCA CGGGCTGCAT
GTTGACCTCG GACCCGGCGA CCGTTTGTTC TACTACACCA CCTGCGGCTG GATGATGTGG
AACTGGCTGG TCTCGGCACT GGCGGTCGGC AGCGCGGTGG TGCTGTATGA CGGTTCACCG
TTTTATCCGG ACAACGAGCG CTTGCTGGAG CTGCTGGACG ACGAACAGGT CAGCGTGTTC
GGCACCAGCC CGAAATTCCT CGCGACCCTG GAAAGCAGCG GCATCAAACC GCGCGAAAGC
TACGACCTGA GCCACCTGAG AACCCTGCTT TGCACCGGCT CCGCACTGTC ACCGCAGAGT
TATGACTTCG TCTATCGCGA CTTCAAACCG GATGTGTGCT TGTCCTCGAT GTCCGGCGGT
ACGGACATCG TGTCCTGCTT CGTCAACGGC AACCCGATGT CAGCAGTCCG CCGGGGCGAA
ATCATGGGCA AGAGCCTGGC CATGGCGGTG GAAGTGTGGA ACGACGCCGG GCAACCGGTC
GTTGGCGAAA AAGGCGAACT GGTGTGTACC CGGTCATTTC CGGCGGTGCC TATCGGACTC
TGGAACGATC CCGATGGCGA GAAACTGCGC AAATCCTATT TCAGCCAGTT CCCCGGCGTC
TGGGCCCAGG GTGACTACGC CGAACAACTG CCCCACGGCG GGATGCTGAT TCACGGCCGC
TCCGACGCCG TGCTCAACCC CGGCGGCGTG CGCATCGGCA CGGCGGAAAT CTACCGTCAG
GTGGAGAAAG TCCCGCAAGT GCTGGACAGC GTCGCCATCG GCCAACAGTG GCAGGACGAT
GTGCGCGTGG TGCTGTTCGT GCACCTCAAG GACGGCGTAA CGCTGGATGA CACGCTGCAA
CAGCAGATCC GCCAGGTGAT CCGTGCCAAC ACCACACCGC GCCATGTGCC GGCGAAGATC
GTCGCGGTCA CCGACATTCC GCGCACCATC AGCGGCAAAG TGGTGGAGCT GGCCGTGCGC
AATGTGGTGC ACGGTGAACC GGTGAAAAAC ACCGATGCGC TGGCCAATCC GCAAGCGCTC
GAGCAGTTTC GCGATCGACC GGAATTGAAC AGCTGA
|
|---|
| Protein sequence | MSDILWQPDA KRIARSRMDG FRRFINQRHH LKLDDYPALH QWSIDQREAF WQAIVDFFGI
SFHTQPDAVL RGGLKMPGAE WFPGATLNFA EHLLSRRDDA IAVIAIGENG QRELLTWAEL
AQQVAGFQAS LQAAGVLVGD RIAACMPNTW QTLVAMLATT SLGAIWSCSS PDFGTHGVID
RFGQIEPKVL ITCAGYRYAG KEIDQTVKVN EILEQLPSLQ QLIIVPYARP QAHATDYRTP
ANVTLWDDFY EPGDEPQFVP VPFDHPLYVL YSSGTTGVPK CIVHSTGGVL LQHVKEHGLH
VDLGPGDRLF YYTTCGWMMW NWLVSALAVG SAVVLYDGSP FYPDNERLLE LLDDEQVSVF
GTSPKFLATL ESSGIKPRES YDLSHLRTLL CTGSALSPQS YDFVYRDFKP DVCLSSMSGG
TDIVSCFVNG NPMSAVRRGE IMGKSLAMAV EVWNDAGQPV VGEKGELVCT RSFPAVPIGL
WNDPDGEKLR KSYFSQFPGV WAQGDYAEQL PHGGMLIHGR SDAVLNPGGV RIGTAEIYRQ
VEKVPQVLDS VAIGQQWQDD VRVVLFVHLK DGVTLDDTLQ QQIRQVIRAN TTPRHVPAKI
VAVTDIPRTI SGKVVELAVR NVVHGEPVKN TDALANPQAL EQFRDRPELN S
|
|---|
| |