| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3077 |
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| Symbol | |
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| ID | 3712764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3520782 |
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| End bp | 3522209 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | sigma54 specific transcriptional regulator |
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| Protein accession | YP_348806 |
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| Protein GI | 77459299 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCG CCATGAACAC CACCGAAAGC CTCAAGGATT ACCAACGGGT TCGCGCCCTG
GCGATCCGTT CGTTGTTCGA GATCATCGAG CAATCCAGTG AGGGCACGGT GATTGTCGAC
CGCGACGCGA ACATCGTCTG GATGAACGAG CGCTACGCTC GGCGCTTCGG GCTCGACTCC
GCCGCCGGGG CCATCGGCAA GCCTTGCGAA AGCGTGATCC CCGGCAGCCT GTTGCGTGAA
GTGGTACGCA CCGGTCGGCC GATTCTGCTG GACATGCAGG ACACCCCGAA AGAACCGCTG
GTGGTGATGC GCCTGCCGAT CCATGACGAC GCCGGCGCGG TGATCGGCGC CATCGGTTTT
GCCCTGTTCG ACGAACTGCG CACGCTGTCG CCGATGCTCA AGCGCTACCT GAGCATGCAG
GAAGAACTGG CCTCGACCCG TTCACTGCTG CGCGCCCGGC AGACCAAATA CAACTTCGCG
CACTTCATCG GCACCAGCGC TGCCAGCCTG GAAGTCAAAC GCCGTGCCCG TCGCAGCGCC
AGTGCCGAGT CGCCGGTTCT GTTGCTGGGC GAAACCGGCA GCGGCAAGGA GTTGCTGGCG
CAAGCGATCC ACGGCGCTTC GCCTCGGGCG CACAAGGCGT TCGTCAGCAT CAACAGCGCA
GCGATTCCCG AGGCGCTGCT CGAGGCCGAG TTCTTCGGCA CCGCGCCCGG CGCCTTCACC
GGCGCCGACC GCAAGGGCCG CACCGGCAAG TTGCAGATTG CTCAGGGCGG GACGCTGTTT
CTCGACGAGA TCGGCGACAT GCCGCTGCCC TTGCAAAGCA AATTGTTGCG GGTGTTGCAG
GAAAAGGAGT TCGAACCTGT AGGCTCCAAC GACGTGATCC AGAGCGATGT GCGGGTGATT
GCGGCGACCT CGACGGATCT GGAGGCGGCG ATCAAGCGCG GCGAATTCCG CGCCGACTTG
TATTACCGCC TCAACGTATT GCCAATTCAG GTGCCGCCAC TGCGTGAACG ACTGGACGAT
CTGCCGGCCC TCAGTGAGGC GATTCTTGAA GAACTGCGCA GTCAACATGA ACTGAACCGC
GAAGCGCTGG AGCTGCTGGG TCAGCATGCC TGGCCAGGCA ATATCCGCGA GCTGCGCAAT
GTATTGGAGC GGGCAGCGTT GCTCAGCGAT GACTTGATGC TGACGGCGGA TGACATTCGC
TCTGCAATTG GAACGTTTAC ACCGGTTGAG CGAACGCTGG CACCCTTGCC TGAACCGGCA
ATCAACGAGA CCTTCAGTCA AGCCCGGGAG CGTTTTGACC GGCAGTTGAT TCAATCCACC
CTCGCGCAAT GCGGGGGCAA GGTGATTGAG GCGGCTGAGC GGTTGGGACT GGGCCGTTCG
ACGCTTTACA AGAAAATGAT TGCGCTGGGG ATCGCAGAGT CTCAATAA
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| Protein sequence | MDAAMNTTES LKDYQRVRAL AIRSLFEIIE QSSEGTVIVD RDANIVWMNE RYARRFGLDS
AAGAIGKPCE SVIPGSLLRE VVRTGRPILL DMQDTPKEPL VVMRLPIHDD AGAVIGAIGF
ALFDELRTLS PMLKRYLSMQ EELASTRSLL RARQTKYNFA HFIGTSAASL EVKRRARRSA
SAESPVLLLG ETGSGKELLA QAIHGASPRA HKAFVSINSA AIPEALLEAE FFGTAPGAFT
GADRKGRTGK LQIAQGGTLF LDEIGDMPLP LQSKLLRVLQ EKEFEPVGSN DVIQSDVRVI
AATSTDLEAA IKRGEFRADL YYRLNVLPIQ VPPLRERLDD LPALSEAILE ELRSQHELNR
EALELLGQHA WPGNIRELRN VLERAALLSD DLMLTADDIR SAIGTFTPVE RTLAPLPEPA
INETFSQARE RFDRQLIQST LAQCGGKVIE AAERLGLGRS TLYKKMIALG IAESQ
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