Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3076 |
Symbol | |
ID | 3712763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3519179 |
End bp | 3520753 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_348805 |
Protein GI | 77459298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA ATCTGATCGA AATCCGTGAC CTCAGCGTCG CCTTCCATGG CCAGACCGTG GTGCGCAACC TGTGCCTGGA CATCCGCCCC GGCGAGTGCC TGGCACTGGT CGGCGAGTCG GGTTCGGGCA AGTCGGTGAC GGCCAACTCG ATCCTGCAAC TGCTCCCCGA ATCCGATGCC AGAACGACCG GCAGTATTCG TTATCGCGGA CAGGAACTGG TCGGTGCCGA TCCCAAGACC CTGCGCGACC TGCGTGGCAA CCGTATCGCC ATGATTTTCC AGGAGCCGAT GACCTCGCTC AATCCGTTAC ACACGATTGA AAAGCAGATC GGCGAAACCC TGTTGCTGCA CCGCGGCCTC GGCGGCAAAG AGGCTCAGGC GCGGATCCTC GAACTGCTGG AACTGGTGGG CATCCAGAAA CCGAAAGAGC GACTGAAGGC CTATCCGCAC CAGCTGTCCG GCGGCCAACG CCAGCGTGTG ATGATCGCCA TGGCCCTGGC TTGCGAGCCC GAACTGCTGA TCGCCGACGA GCCGACCACC GCCCTCGATG TGACCGTGCA GCGCAAGATC CTGTTGCTGC TCAAATCCTT GCAACGGCGC CTGGGCATGT CGCTTCTGCT GATCAGTCAC GACCTCAATC TGGTGCGCAG CATCGCCCAA CGGGTGTGCG TGATGAAGGC CGGCGAGATC GTCGAGCAGG CGCCGTGCGA AACCCTGTTC ACCGAGCCGA AACACCCTTA CAGCTGCGTG TTGCTCAACG CTGAACCGGA AGGCGAAGCG CTCCCGCGGG ACGAACGCGA AAACGTGCTC GAAGTCGATG ACCTGCGGGT TGATTTCACG GTCGGCGGCG GGCTGTTCCA GCGCAAGCAA TACCTGCGCG CGGTGGACGG CATCAGCCTG AACATCCAGC GCGGCAAGAC GCTGGGCATC GTCGGCGAGT CCGGTTCGGG CAAGTCCACC CTCGGGCAGG CGATTCTGCG ACTGCTCGAC TCCAAGGGCA GCATTCGCTT CCAGGGCACG GCACTCGACG GTCTCGACCA GAAACAGATG CGGCCGTGGC GCCGGCAGAT GCAGGTGGTG TTCCAGGACC CGTTCGGCAG TCTCAGCCCG CGCATGTCGG TAGCGCAGAT CATCAGCGAA GGGCTGGAGG TGCATTGCCA GTCCACCGCC GAGGAGTGCG ACGATCAGGT GATCCGCGTG CTCAAGGAAG TGGGCCTCGA CCCTGAAAGC CGTCACCGCT ACCCCCATGA GTTTTCCGGC GGGCAGCGTC AGCGCATTGC CATTGCCCGG GCACTGGTGC TCAAACCGGC GCTGATCCTG CTCGATGAGC CGACTTCGGC GCTGGATCGC ACCGTGCAGA AACAGGTGGT CGCCCTGCTC CGCCAGCTAC AGGAAAAACA CGGCCTGACG TATCTGTTCA TCAGTCATGA CCTGGCCGTG GTGCGGGCGC TGGCCCACGA CATGATCGTG ATCAAGGACG GCAAGGTGGT CGAACGCGGC GCCAGCCATG ACGTGTTCGA TTCACCGCAG CATCCCTATA CCAAAGAGCT GTTGGCCGCG GCGCATCCGG GATAG
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Protein sequence | MTDNLIEIRD LSVAFHGQTV VRNLCLDIRP GECLALVGES GSGKSVTANS ILQLLPESDA RTTGSIRYRG QELVGADPKT LRDLRGNRIA MIFQEPMTSL NPLHTIEKQI GETLLLHRGL GGKEAQARIL ELLELVGIQK PKERLKAYPH QLSGGQRQRV MIAMALACEP ELLIADEPTT ALDVTVQRKI LLLLKSLQRR LGMSLLLISH DLNLVRSIAQ RVCVMKAGEI VEQAPCETLF TEPKHPYSCV LLNAEPEGEA LPRDERENVL EVDDLRVDFT VGGGLFQRKQ YLRAVDGISL NIQRGKTLGI VGESGSGKST LGQAILRLLD SKGSIRFQGT ALDGLDQKQM RPWRRQMQVV FQDPFGSLSP RMSVAQIISE GLEVHCQSTA EECDDQVIRV LKEVGLDPES RHRYPHEFSG GQRQRIAIAR ALVLKPALIL LDEPTSALDR TVQKQVVALL RQLQEKHGLT YLFISHDLAV VRALAHDMIV IKDGKVVERG ASHDVFDSPQ HPYTKELLAA AHPG
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