Gene Pfl01_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3076 
Symbol 
ID3712763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3519179 
End bp3520753 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content63% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_348805 
Protein GI77459298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA ATCTGATCGA AATCCGTGAC CTCAGCGTCG CCTTCCATGG CCAGACCGTG 
GTGCGCAACC TGTGCCTGGA CATCCGCCCC GGCGAGTGCC TGGCACTGGT CGGCGAGTCG
GGTTCGGGCA AGTCGGTGAC GGCCAACTCG ATCCTGCAAC TGCTCCCCGA ATCCGATGCC
AGAACGACCG GCAGTATTCG TTATCGCGGA CAGGAACTGG TCGGTGCCGA TCCCAAGACC
CTGCGCGACC TGCGTGGCAA CCGTATCGCC ATGATTTTCC AGGAGCCGAT GACCTCGCTC
AATCCGTTAC ACACGATTGA AAAGCAGATC GGCGAAACCC TGTTGCTGCA CCGCGGCCTC
GGCGGCAAAG AGGCTCAGGC GCGGATCCTC GAACTGCTGG AACTGGTGGG CATCCAGAAA
CCGAAAGAGC GACTGAAGGC CTATCCGCAC CAGCTGTCCG GCGGCCAACG CCAGCGTGTG
ATGATCGCCA TGGCCCTGGC TTGCGAGCCC GAACTGCTGA TCGCCGACGA GCCGACCACC
GCCCTCGATG TGACCGTGCA GCGCAAGATC CTGTTGCTGC TCAAATCCTT GCAACGGCGC
CTGGGCATGT CGCTTCTGCT GATCAGTCAC GACCTCAATC TGGTGCGCAG CATCGCCCAA
CGGGTGTGCG TGATGAAGGC CGGCGAGATC GTCGAGCAGG CGCCGTGCGA AACCCTGTTC
ACCGAGCCGA AACACCCTTA CAGCTGCGTG TTGCTCAACG CTGAACCGGA AGGCGAAGCG
CTCCCGCGGG ACGAACGCGA AAACGTGCTC GAAGTCGATG ACCTGCGGGT TGATTTCACG
GTCGGCGGCG GGCTGTTCCA GCGCAAGCAA TACCTGCGCG CGGTGGACGG CATCAGCCTG
AACATCCAGC GCGGCAAGAC GCTGGGCATC GTCGGCGAGT CCGGTTCGGG CAAGTCCACC
CTCGGGCAGG CGATTCTGCG ACTGCTCGAC TCCAAGGGCA GCATTCGCTT CCAGGGCACG
GCACTCGACG GTCTCGACCA GAAACAGATG CGGCCGTGGC GCCGGCAGAT GCAGGTGGTG
TTCCAGGACC CGTTCGGCAG TCTCAGCCCG CGCATGTCGG TAGCGCAGAT CATCAGCGAA
GGGCTGGAGG TGCATTGCCA GTCCACCGCC GAGGAGTGCG ACGATCAGGT GATCCGCGTG
CTCAAGGAAG TGGGCCTCGA CCCTGAAAGC CGTCACCGCT ACCCCCATGA GTTTTCCGGC
GGGCAGCGTC AGCGCATTGC CATTGCCCGG GCACTGGTGC TCAAACCGGC GCTGATCCTG
CTCGATGAGC CGACTTCGGC GCTGGATCGC ACCGTGCAGA AACAGGTGGT CGCCCTGCTC
CGCCAGCTAC AGGAAAAACA CGGCCTGACG TATCTGTTCA TCAGTCATGA CCTGGCCGTG
GTGCGGGCGC TGGCCCACGA CATGATCGTG ATCAAGGACG GCAAGGTGGT CGAACGCGGC
GCCAGCCATG ACGTGTTCGA TTCACCGCAG CATCCCTATA CCAAAGAGCT GTTGGCCGCG
GCGCATCCGG GATAG
 
Protein sequence
MTDNLIEIRD LSVAFHGQTV VRNLCLDIRP GECLALVGES GSGKSVTANS ILQLLPESDA 
RTTGSIRYRG QELVGADPKT LRDLRGNRIA MIFQEPMTSL NPLHTIEKQI GETLLLHRGL
GGKEAQARIL ELLELVGIQK PKERLKAYPH QLSGGQRQRV MIAMALACEP ELLIADEPTT
ALDVTVQRKI LLLLKSLQRR LGMSLLLISH DLNLVRSIAQ RVCVMKAGEI VEQAPCETLF
TEPKHPYSCV LLNAEPEGEA LPRDERENVL EVDDLRVDFT VGGGLFQRKQ YLRAVDGISL
NIQRGKTLGI VGESGSGKST LGQAILRLLD SKGSIRFQGT ALDGLDQKQM RPWRRQMQVV
FQDPFGSLSP RMSVAQIISE GLEVHCQSTA EECDDQVIRV LKEVGLDPES RHRYPHEFSG
GQRQRIAIAR ALVLKPALIL LDEPTSALDR TVQKQVVALL RQLQEKHGLT YLFISHDLAV
VRALAHDMIV IKDGKVVERG ASHDVFDSPQ HPYTKELLAA AHPG