Gene Pfl01_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3074 
Symbol 
ID3712761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3517082 
End bp3518143 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content60% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_348803 
Protein GI77459296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCTT ACATACTGCG GCGCCTGCTG CTGATCATTC CGACGCTGGT GATTATTCTG 
CTGGTCAATT TCGTGATCAT CCAGGCCGCG CCGGGCGGCC CGGTTGAACA GGCCATTGCC
CACTTGCAAG GCATCGGCGG CGCCAGTGTC GGCGGTGGTG CGAGCGAGAC CATGAGCGGC
ACGTCCCGCG CCAGCCGCGG CCTCGATCCG CAGCTGATCA AGGACATCGA AAAACAGTAC
GGCTTCGACA AACCCGCCCA TGAACGCCTG TGGCTGATGC TCAAGAATTA CGCGCAACTG
GATTTCGGCA AAAGCTTTTT CCGCGGCGCC ACGGTCACCG ACCTGATCCT GCAGAAAATG
CCGGTGACCA TTTCCCTTGG CCTGTGGGCG ACGCTGATCA CTTATCTGGT GTCGATCCCG
CTGGGCATCC GCAAAGCCGT GCACCACGGC AGCCATTTCG ATATCTGGAG CAGCACGGCG
ATCATCATCG GCTACGCCAT GCCGGCATTC CTGTTCGCGA TGTTCCTGAT CGTGGTGTTC
GCCGGCGGCA CCTCGCTGAA CTGGTTTCCG GTGCGCGGGC TGGTGTCCGA CAACTTCGAA
TCCCTGTCGA CAATGGGCAA GATCACCGAC TACTTCTGGC ATCTGGTGCT GCCGGTCACG
GCGCTGGTGA TCGGCGGTTT CGCCACCCTG ACCATCCTCA CCAAGAACTC GTTCCTCAAT
GAAATCACCC GTCAATACGT GGTCACCGCG CGCGCCAAAG GCCTGAGCGA AAACCGGGTG
CTCTACGGAC ACGTGTTCCG CAACGCGATG CTGCTGGTGG TGTCGGGCAT TCCCCAGGCG
TTCATCAGCG TATTCTTCGC CGGTTCGTTG CTGATCGAAG TGATCTTCTC TCTCGACGGT
CTGGGGCGCA TGAGTTACGA AGCGGCCGTG TCCCGTGATT ATCCGGTGGT GTTCGGCTCG
CTGTTCATCT TCACCTTGTT CGGCCTCCTG ATAAAACTGA TCGGCGACCT GTGCTACACC
CTGGTCGACC CGCGCATCGA CTTCGCCGCG AGGAACGCCT GA
 
Protein sequence
MWAYILRRLL LIIPTLVIIL LVNFVIIQAA PGGPVEQAIA HLQGIGGASV GGGASETMSG 
TSRASRGLDP QLIKDIEKQY GFDKPAHERL WLMLKNYAQL DFGKSFFRGA TVTDLILQKM
PVTISLGLWA TLITYLVSIP LGIRKAVHHG SHFDIWSSTA IIIGYAMPAF LFAMFLIVVF
AGGTSLNWFP VRGLVSDNFE SLSTMGKITD YFWHLVLPVT ALVIGGFATL TILTKNSFLN
EITRQYVVTA RAKGLSENRV LYGHVFRNAM LLVVSGIPQA FISVFFAGSL LIEVIFSLDG
LGRMSYEAAV SRDYPVVFGS LFIFTLFGLL IKLIGDLCYT LVDPRIDFAA RNA