Gene Pfl01_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3070 
Symbol 
ID3712757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3512377 
End bp3513444 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348799 
Protein GI77459292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGTG AGGGTATTCG GTCGCCCGGG TTGTGTCGGG AGCGTGGTCG GGCTCTGCCG 
TTGCCGGCTC CCGCACTGGA TTCCATTACA GGGGCGGTCA TTGATCCGTC ATTGAGCAGG
GTTGTCGTCA GGATTGCGCC CTGGCCTGGA ATGGCGTGCG GGGACCGGGT GGTTTTGAGT
TGGCATGGTC TCGATATACA AGGTTTGCCA TATCGGCACG ACATTTCGCG ATCCGTCAGT
GAAGGGCAAT TGGGCAAGGA TATCGTTCTG ATCGTACGGG ACGCTCACAT CGCTGCGCTG
GACGGGGGGA CTCTGGAAGT CTTCTGGACG TTGACCAGCG TCACGAGATC GGAGCCTGTC
ACTTCATTGC GTACACAGCT GGACGTTGGG GACATCCGTT ACAGTCTGTT GCCAGCCATC
GTCGAGGATG CCGTCGGAGG CAGTCTCGAT CCGGCTCGCG TACCCTACGG AACGACTGCC
ATTCTTCAAC CTTATGCAGG CATGAGTGCA GGCGATCGGG TGCAGTTGAT CTGGCAGGGG
CCTTCACCGG AGGCATCGTT TCGAGACGCG CTTATCGTTG AGTTCTTTGC TGTTGGTCAG
CCTCTGGTGT TCGGGATCGC TCCTGAATTC ATCGCCCCGC ATTTTGGGGG CGAGGTGGTG
ATTCGCTACC GTATCGAGCA GAAGAGCGGA GCCATACACG AGTCAGGTGT TACGCGAGTC
AGCATTGCTC CATTGGTACG AGGTGAGCTG CCGGCTCCTC AGGTGCTTGA AGCGGATGAT
GGAGTGCTCA ATGTGACGGA TGCCATCGAT GGTGTCAGCG TGCTGATAAG TGATGCGCGA
GTCGAGGAGG GCGAGCTGGT TTATCTCAAG TGCGATGGCG AGTCGTTTTT TCACCGTGAC
GACCGAGAAA TCATCAGCGG GATGGCCATG CAGTCTTTGG TGTTCATCGT GCCTTATCGG
TTCTGGCGCG AGCACGTCAA TACCGTCGTG CGGCTATCCT ACTCGGTCGA GCGGCTGGAC
GACGTCAGTC AGCAGTCCGA GGTGATGTTG CTGCAAGTGC AGGCGTGA
 
Protein sequence
MDGEGIRSPG LCRERGRALP LPAPALDSIT GAVIDPSLSR VVVRIAPWPG MACGDRVVLS 
WHGLDIQGLP YRHDISRSVS EGQLGKDIVL IVRDAHIAAL DGGTLEVFWT LTSVTRSEPV
TSLRTQLDVG DIRYSLLPAI VEDAVGGSLD PARVPYGTTA ILQPYAGMSA GDRVQLIWQG
PSPEASFRDA LIVEFFAVGQ PLVFGIAPEF IAPHFGGEVV IRYRIEQKSG AIHESGVTRV
SIAPLVRGEL PAPQVLEADD GVLNVTDAID GVSVLISDAR VEEGELVYLK CDGESFFHRD
DREIISGMAM QSLVFIVPYR FWREHVNTVV RLSYSVERLD DVSQQSEVML LQVQA