Gene Pfl01_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3069 
Symbol 
ID3712756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3511237 
End bp3512313 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content61% 
IMG OID 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_348798 
Protein GI77459291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGT CCGTTTCTGC TCTGCCACTG TCCACCCTGA ACCCTGCCAA CGAAGCATTG 
ACCCTGCGTC TGCCGAGTTC GCTGCAACTC AAACAGCAAT TGCCCCTGAG CAATGCGCTG
AACCAGCAAG TCGTTGCACA CCGCCAGGCG GTCCGCGCGA TTCTCGATGG CCATGACCCG
CGTTTGCTGG TGATCGTCGG CCCCTGCTCG ATACACGACC CTGAGTCCGC GCTTGAATAC
GCCAGCAAAC TTTCGCATCT GGCCGAAGAA GTCCGTGATG ACATGCTGCT GGTGATGCGT
GCCTACGTCG AAAAACCTCG CACCACCGTC GGTTGGAAAG GCCTTGCCTA CGACCCTCAT
CTGGATGGCA GCGACGACAT GGCTGCCGGC CTCACCCTGT CGCGCGAACT GATGCTCGAA
ATGATCCGCG TCGGACTTCC GATTGCCACC GAACTGCTGC AGCCCATGGC CGCCGGGTAC
TTCGATGACT TGCTGAGCTG GGTCGCCATT GGCGCCCGTA CTACCGAGTC CCAGATCCAC
CGGGAAATGG CCAGTGGACT GAGCATGCCG GTCGGCTTCA AGAACGGCAC CGATGGCGGC
GTGACTGTCG CCGTTGACGC GATGCGTTCG GCAGCACATC CCCATCGTCA CTTCGGCGTC
GACAGCCAGG GCCACCCGGC AATCATCCAG ACCCCGGGCA ACCAGGACAC ACATCTGGTG
CTGCGCGGTG GCCACCAAGG GCCGAACTAC GACCGCGAAA GCGTTTCCAG AATCAACGCC
GAGTTGAACC GCCTGAAGAT CCCGAAGCGG ATGATGGTTG ATTGCAGTCA TGCCAACAGT
GGCAAGGACC CACTCCGGCA GCCAGGCGTG TTCAACGATG TGCTGGAGCA ACGCTTGAAG
GGCGACCGCT CGCTGGTCGG CATGATGCTT GAGTCACACC TGTTTGAAGG ATGCCAGCCG
TTGAGCGAGT CGCTTCGGTA CGGAGTTTCG ATTACCGATG CCTGCCTCGG GTTCGATTCC
ACCAGGCAGT TGCTGCTGGA CGCAGCGCAT CGCATGCGAA AACAGACCTC AGCCTGA
 
Protein sequence
MNSSVSALPL STLNPANEAL TLRLPSSLQL KQQLPLSNAL NQQVVAHRQA VRAILDGHDP 
RLLVIVGPCS IHDPESALEY ASKLSHLAEE VRDDMLLVMR AYVEKPRTTV GWKGLAYDPH
LDGSDDMAAG LTLSRELMLE MIRVGLPIAT ELLQPMAAGY FDDLLSWVAI GARTTESQIH
REMASGLSMP VGFKNGTDGG VTVAVDAMRS AAHPHRHFGV DSQGHPAIIQ TPGNQDTHLV
LRGGHQGPNY DRESVSRINA ELNRLKIPKR MMVDCSHANS GKDPLRQPGV FNDVLEQRLK
GDRSLVGMML ESHLFEGCQP LSESLRYGVS ITDACLGFDS TRQLLLDAAH RMRKQTSA