| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3041 |
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| Symbol | |
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| ID | 3712725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3482296 |
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| End bp | 3482943 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_348770 |
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| Protein GI | 77459263 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000032992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.146168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCT TCAACGTTGT CATCGCCGAT GATCACCCTA TCGTCCTGCT GGGGGTGCGG
GAACTGGTCG AGCGTGACCG CCGCTTCAGC GTAGTGGGCG AAGCCGTTTG CCCCGATGAG
CTGATCGACT TGCTGACGAC CTGGCCGGTA GACCTGTTGA TCACCGATTT CAACATGCCC
GGTGACTCGC GCTACGGTGA CGGGCTGAAA CTGGTGGAAT ACGTGACCCG GCATTTCCCT
CAGGTGCGGG TGCTGGTTCT GACCATGATT TCCAACCCGT TGATCCTGAC CCGTCTGCAG
GAACTCGGTG TACTGTCGGT GATTCAGAAA AACCAGTTGC ACGTTGAAAT AGAAGTGGCG
CTCAAAGCCA TTGCCAAAGG CAATACGGTT CGCAGCAAAC AACCCGCACC CACTTCGGTA
CTGGACAATA GCGCTGACCT CGATGAACGT TTTGCTCGTC TGTCGCCCAA GGAACATGAA
ATCCTGCGCT TGTTTGTGCA AGGACAAGGC GTCAATGAAA TAGCCCGCGG ACTTAACCGA
AGTGCCAAGA CAATCAGTAC GCAGAAAGTT TCCGCCATGC GCAAACTTGA AGTAAACAGC
GATCAGGAGT TACTGGCTTA TTGTATAGAG CGCAACTTGT TCAACTAG
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| Protein sequence | METFNVVIAD DHPIVLLGVR ELVERDRRFS VVGEAVCPDE LIDLLTTWPV DLLITDFNMP
GDSRYGDGLK LVEYVTRHFP QVRVLVLTMI SNPLILTRLQ ELGVLSVIQK NQLHVEIEVA
LKAIAKGNTV RSKQPAPTSV LDNSADLDER FARLSPKEHE ILRLFVQGQG VNEIARGLNR
SAKTISTQKV SAMRKLEVNS DQELLAYCIE RNLFN
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