| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3039 |
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| Symbol | |
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| ID | 3712723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3477837 |
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| End bp | 3479024 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_348768 |
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| Protein GI | 77459261 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0303288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.300283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCC CTAGCCTGCT GATTGTCGAA GATCACCCGT TCCAGCATCT GTACTTGCAG
AACCTGTTCA ACGAGCTGGG CGTCTTCGAT CTGGAGTTTG CCAGGGACGG CGAAGAAGCC
TTGCGGCGCC TGAAAAACCG CGAGTTCGAC CTGGTGCTCA CCGACCTGCT GATGCCAGGC
ATGGACGGCG TGCAGTTCAT TCAGGGCCTG GCCGCGCAGC CCTCCCGCCC GGCACTGGCG
ATCATGAGTG CCGCCTCACG GCGCATGCTG ATGGGCGCGA GCCTGGTGGC GAGCAATCTG
CAGGTCAAAG TCATCGGGCT GATTTCCAAA CCGGTCAACA GCGCCGCCCT GCGTTGCCTG
ATCGACCAGT TGCAGGCGCT GCGTCAGGAC GTGCCGATCG CCGCGCAGGC TGGCATCGAC
CGCCAGAGCC TTGTACGGGC GTTGGATAAC GGTGAGCTGC AGGCCTGGTT TCAACCAAAG
AAGGCGCTGG ATAATGGTCG CATCGTCGCC GCCGAAGCAC TGGTGCGCTG GGCTCACCCG
GAACACGGCA CATTGTTGCC CGGCGCATTT CTACCGGCGC TGATCGCCTG CGATCTCGAA
GAGCACCTGC TCTGGCGGGT ACTGGAACAG GCAATGGCCG CCCAAGCGGT ATGGCGCCAG
CAGGGCTATG ACATTCCGGT GTCGATCAAC CTGCCGACGC ACCTGCTCAA CAGTCACGAC
CTGCCGGATC GCATTCTCGC TTTTGTCCTG CAACACAACG GGCTGCCGGC GCGGATCTGT
TTCGAGTTGA TGGAGTGCTC GGTGCCCGAT GACATAAGCA ATTTCTACGC CGGTGCCTGC
CGCTTGCGAA TCAAGGGTTT CGGCCTGTCA CAGGATGATT TCGGCAAGGG CTACAGTTCC
TACATGAACC TGGTCTCAGC CCCTTTCACC GAACTGAAAA TCGATCGCGC GCTGGTGCAG
GGTTGTAACC GCAACGCCGA ACTGGCGCAG GCGCTGACCA GCATTGTCAC CCTTGGCCGG
CAACTGGGTC TGACGGTGGT CGCCGAAGGC GTAGAAACCG CGCAGGAACT TGCTCTGTTG
CGTAAAATCG ACTGCACTCA GGTCCAGGGT TTCCTGATCT CCCACGCCGT GTCTTCGGAG
CAGTTCCAGC AGTTGCTCTG TCATGACGGA CCGGCGAATG TCTGGTGA
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| Protein sequence | MKSPSLLIVE DHPFQHLYLQ NLFNELGVFD LEFARDGEEA LRRLKNREFD LVLTDLLMPG
MDGVQFIQGL AAQPSRPALA IMSAASRRML MGASLVASNL QVKVIGLISK PVNSAALRCL
IDQLQALRQD VPIAAQAGID RQSLVRALDN GELQAWFQPK KALDNGRIVA AEALVRWAHP
EHGTLLPGAF LPALIACDLE EHLLWRVLEQ AMAAQAVWRQ QGYDIPVSIN LPTHLLNSHD
LPDRILAFVL QHNGLPARIC FELMECSVPD DISNFYAGAC RLRIKGFGLS QDDFGKGYSS
YMNLVSAPFT ELKIDRALVQ GCNRNAELAQ ALTSIVTLGR QLGLTVVAEG VETAQELALL
RKIDCTQVQG FLISHAVSSE QFQQLLCHDG PANVW
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