Gene Pfl01_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3020 
Symbol 
ID3712704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3456658 
End bp3457464 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348749 
Protein GI77459242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.508615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC TGGGACTCAC CGTCGCACTG ATGCTATGGG GAGCTGCAGC GCAGGCCGTC 
GAGCTAATGC ACTGGGAACG CCTACCCCTC GCGGTCCCTC TGGTGATCAA TCAGGAACGG
GTGGTCTTTG TCGATGAGAA TGTTCGAGTC GGCGTGCCCT CAACCCTGAC AGGTAAGCTG
CGCGTACAAT CAACTGGCGG CACGCTGTAC CTGCGCGCGT CGGAATCCAT TGCCCCGACC
CGACTGCAAC TGCAATCGGT CACGACGGGT GAAATCATCC TGCTGGATAT CGCGGCCACG
CCTGGTGATC AACCGCTGGA GCCCGTGCGT ATTCTCAAGA ACGCTCAGGA GCAAGCTGCC
GAAGCTGTCT CTAGCACCGT CCCTGTTCCA GAACGTACAC CGATCCCGGT CGCTTTGACG
CGCTACGCCG CGCAAAGCCT GTACGGGCCT CTGCGCACCG TGGAGTCTCT GCCCGGCGTA
CGCCGCGTCC CGCTCAAGCT GCGCACCGAA TTGCCGGCCC TGCTGCCGAC CGAAAACGTG
TCCAGCATGC CCATCGCCGC CTGGCGACTC GGTGATTACT GGGTGACGGC GGTGAAGTTG
CGCAATCGTG GCTTAGAGAC GGTGCAACTC GATCCGCGCC GGCTTCAGGC CAAGCTATTT
GCCGCGGCCT TCCAGCATGC TTTCCTCGGA CCTGTCGGCA GTGCTGAAGA CACCACGATT
GCCTACCTCG TCACCCGCGG TGCCGGCCTC GAACACGCGG TGCTATTACC TCCGCCCGTT
GCGCGAGGTG CTAGCGATGA AAGCTAA
 
Protein sequence
MSTLGLTVAL MLWGAAAQAV ELMHWERLPL AVPLVINQER VVFVDENVRV GVPSTLTGKL 
RVQSTGGTLY LRASESIAPT RLQLQSVTTG EIILLDIAAT PGDQPLEPVR ILKNAQEQAA
EAVSSTVPVP ERTPIPVALT RYAAQSLYGP LRTVESLPGV RRVPLKLRTE LPALLPTENV
SSMPIAAWRL GDYWVTAVKL RNRGLETVQL DPRRLQAKLF AAAFQHAFLG PVGSAEDTTI
AYLVTRGAGL EHAVLLPPPV ARGASDES