Gene Pfl01_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3013 
Symbol 
ID3712697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3452953 
End bp3453684 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348742 
Protein GI77459235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.531569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT CCGCCCAGAA CACGCCACCA CAACCGATCC AGCGTCCAGG ACTGATCATC 
TCGACGATCA GCCTGGTACT GCGCGTCATC GGTTTGCTGA TCGCCTCGTT GCTGTTCTCG
ATCCTGATCG AGTTCGCTGG TTTGCTGCTG TTCTGGGGTG ATCAGGGCTG GCTGCATAGT
CAGGCCATGC TAACCAGTGA ATTAGGCTGG CTCAGCGAGC ACTTCAAATC TTCACTTCTC
ATCCAACAGC CTGGGCCAAC GATTGTCCAG TGGCTGGATT TACTCAATCA GTGGCTACTG
GTCAAAACTG GCTTTGCAGA TTTTGCCCAG CAGGCGCGGG TATCGAGCAT GGGCAACAGC
TTCTGGGGGT GGATCAATCA GTTTTACGTG AGCATTGAAG ATTTTGTGCT GGCGGCGGTG
TATGTGACCT TTACCTTCAT GGTGCGCCTG ACCATTCTGG TCCTGGCCAC ACCCTTGTTT
CTGCTGGCCT CTCTCACCGG TTTTATCGAT GGTTTGATGC GTCGCGACCT GCGCAAATTT
GGCGCGGGGC GAGAAAGCAG CTTTGTCTAT CACCGCGCCA AGCGCGCAGT GATACCACTG
CTGATCGTGC CCTGGATCAT TTACCTATCC CTGCCCTTTT CGCTCAATCC TATGGTCGTA
TTTTTGCCTT GTGCTGTAAT GCTTGGCATC ACAGTAGCAA TCACGGCAAG TACATTTAAG
AAATATCTCT GA
 
Protein sequence
MATSAQNTPP QPIQRPGLII STISLVLRVI GLLIASLLFS ILIEFAGLLL FWGDQGWLHS 
QAMLTSELGW LSEHFKSSLL IQQPGPTIVQ WLDLLNQWLL VKTGFADFAQ QARVSSMGNS
FWGWINQFYV SIEDFVLAAV YVTFTFMVRL TILVLATPLF LLASLTGFID GLMRRDLRKF
GAGRESSFVY HRAKRAVIPL LIVPWIIYLS LPFSLNPMVV FLPCAVMLGI TVAITASTFK
KYL