Gene Pfl01_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2998 
Symbol 
ID3712160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3440461 
End bp3441279 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348727 
Protein GI77459220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00986967 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGCCC TTAACCCTCA TCTGTCGCAA CGTTTCCGTC CAAGCCTATG CGAGGACAAC 
ACCGTGGCCG ATCACTATCA ACTCAACCTG GGTTCACTGC GCAGCAGCAT CACCCTGACC
CTGCACACCC ACCACGCCGC CCGCATCTGG CAAGGTCGGG CCGCACGTGA AGGCGTCCAC
TCGATCATGG GCATGGCCGG CTACATCAGT GTCACCAACC TGATCAAACA AACTGCGGCC
CAGGATGATC CCTATGCCGA CTGGGCCATC GTGCAACTCG AAGAAAAACT GATGCAGGCA
AAAGCGGGGA TGCTGGAACT GACCCAACAG CTGGACCGAA TCAGACAAGA TCTGCCGACA
CAGATCGACA TGAGCGACAA CCTCAACATC CACCCCGTCA CCTTGCCGTT GTACATCAGC
AGCCAGCTGG GTTTTCTGGC GGTCTACCTG CTGACCGACT ACGACACTCT TGTACGCCGA
GCCCTGTTGT CTCATCACAC CGCCTTGATC GGTCGCAGGG ACATGGAAGC CTGGATCGAT
GACGGCGCCC ATCTGCTGCG CAGCCTATTT GGCCAGGCCC AGCGTTATCG GCATGCCGGC
GTCACGCGTG ATGACATGGC GGCGAACAAC GCCCGTGCCA TTGCGGCCAT CGAGAAGATG
GGTTTGCCTC CGATGGACAT CCTGGAGGGG CATCGCCGCT CCCAGTTCGC GCCGCCAATC
ACTCGCCGTG ATGCGGTGGC AGTGGATGAC GCCGAAGCGT TGGCAGAGGA CGTGGTAGCG
TCGTCTGCGA CAGTGAGTAA GCCGGAGGAC GACGCATGA
 
Protein sequence
MAALNPHLSQ RFRPSLCEDN TVADHYQLNL GSLRSSITLT LHTHHAARIW QGRAAREGVH 
SIMGMAGYIS VTNLIKQTAA QDDPYADWAI VQLEEKLMQA KAGMLELTQQ LDRIRQDLPT
QIDMSDNLNI HPVTLPLYIS SQLGFLAVYL LTDYDTLVRR ALLSHHTALI GRRDMEAWID
DGAHLLRSLF GQAQRYRHAG VTRDDMAANN ARAIAAIEKM GLPPMDILEG HRRSQFAPPI
TRRDAVAVDD AEALAEDVVA SSATVSKPED DA