Gene Pfl01_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2997 
Symbol 
ID3712159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3439114 
End bp3440304 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348726 
Protein GI77459219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0423399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CCCCGTTCAA TCGCTGGCAG CGTGTCCTGC AGCAATGCAC CCAGCAGCTG 
AGTGAACGCT GGCCCGAACG CCCTGCCACT GAACATCCCT CCAACCAGGC CCTGCAAGCT
GGCTTTCTGT TCAGTGGTCA AGCTCACGAA GTCGTGCCAC GTCGGCTGCT GTTGGATTGT
CGGTTGACGC CGTTGGAGCG TAATGCCTGG CAAGTGTTTC GGCTCATGCT GCAAGGCCAG
GGCGTGGTTA CGCCGCGCTA TGAAGATTTG CAGCCTTACC TGTCGAACGT GCCCTACGGT
GCATTAGCCT CCCGTGAAAC CATCGCCCGC GTGTTGACGA TGCTCAGACT AACTCGTTGG
CTCAGCTTGG TGAGTCGCGG ACGCCACCCG CTCAGTGGAC GTCTTCAAGG TTCACTGTAT
GTTCTGCACG ATGAGCCGTT AACTCCTGCC GAAGCCATGG AGCTGGATCA GGATTACCTG
GAGCTGGTCG GACATGCCCT GGGTCATGCG GTGAAGGCTG TACGCATTGT CGCTCAGCAC
ATTGTGGAGG AAGTCCGCCT GGATAAGAAT ATCGAGCGGG ATGTGTTACC GACGCGACTC
GACAGTTGGG GCGAACACTG GACGCAGCAA GGACTGGATC AGCCGGCCGA TGATGCCTTC
CACGATTCCG AACTAGGGGC AAATCACCGC GTTCGGAATC GTGCAGGCCC TGGTTCGGAT
TCCGAACCAG GCTTGAACGC CAGCGTTTCC GGCACCGTTC GGAATCCGAA CGCCGCCTGT
ACTGTATTAA AAGAAAGTAC TTGTACTGTA CCGCGCGCGA CCCCGGCGGT GGATAACCTG
CACTGGCCCG ATCCGCTGCA CCTGAGCCCA AGCGAACGTC AGGTCATCGC TGTGGCGCTG
AACAAGCTCA AACCCGCGGA TCGTCAGGCG GTGCTCAACG AAGCGGGGGC ACGCTGTGCG
GCCGGTGGAA TCCGCAAGCC AGCGGCGTAT CTGATGGGCC TGATCCAGCG TGCGCTGAAA
GGTGACTTTC GTCCTTGGGC AGGTCAGGCG GAACCGTCAC CCATTGCAGA ATCGCCCGCA
CCACCACCCT CGCGCCCCAT TCGAAAACAG GGCGAACCCG TGTCTGCCCT TGCTCAAGCG
TGCCTGAATG AGCTGCGCCA ACTGCGCGGC AAACGCGGTG GACGTCAGTA G
 
Protein sequence
MNAAPFNRWQ RVLQQCTQQL SERWPERPAT EHPSNQALQA GFLFSGQAHE VVPRRLLLDC 
RLTPLERNAW QVFRLMLQGQ GVVTPRYEDL QPYLSNVPYG ALASRETIAR VLTMLRLTRW
LSLVSRGRHP LSGRLQGSLY VLHDEPLTPA EAMELDQDYL ELVGHALGHA VKAVRIVAQH
IVEEVRLDKN IERDVLPTRL DSWGEHWTQQ GLDQPADDAF HDSELGANHR VRNRAGPGSD
SEPGLNASVS GTVRNPNAAC TVLKESTCTV PRATPAVDNL HWPDPLHLSP SERQVIAVAL
NKLKPADRQA VLNEAGARCA AGGIRKPAAY LMGLIQRALK GDFRPWAGQA EPSPIAESPA
PPPSRPIRKQ GEPVSALAQA CLNELRQLRG KRGGRQ