Gene Pfl01_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2993 
Symbol 
ID3712155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3435573 
End bp3435833 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPhage transcriptional regulator, AlpA 
Protein accessionYP_348722 
Protein GI77459215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCAAT CGGCGCCAGG AGTGACCAGC ATGTCCAGCC AATACTCACC CATCGTTGAA 
GCACCTCAAC TGCAGGTCGA GCGTCACATC ATGCGGCGTG ACGAGGTGGA GCGTAAAACC
GGCTTCAAGC GTGCGCACAT TTACAACTTG ATGAAGGAAG GGAAATTTCC TCAGGCTAAA
CGCATTGGAT TGCGCGCAGT CGGATGGGAC TCGCTAGAGA TCGAACGGTG GATCGTTGAA
CGCTTAGGCC ATCAGGTCTG A
 
Protein sequence
MCQSAPGVTS MSSQYSPIVE APQLQVERHI MRRDEVERKT GFKRAHIYNL MKEGKFPQAK 
RIGLRAVGWD SLEIERWIVE RLGHQV