Gene Pfl01_2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2976 
Symbol 
ID3712347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3415294 
End bp3417174 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content52% 
IMG OID 
ProductFis family transcriptional regulator 
Protein accessionYP_348707 
Protein GI77459201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATGTA ATCATATGCG GCTGGTCATT ATTAATGATA AAAACATACA AGAATGTGGA 
AAGGTAATGA GTGGTCAGCA AATGAATATA AGAGACATGC ATGGCCTTGA TGAGGTTCGG
CGTCGCTTTC TGGATGGGCA CTCTTTGCCG GCGGATCTGC TGCCTACTGC AGTAGCCAAT
TCTTGGGAGC GGTCCAGGAA AGCAGGGCTC TCACCTTGGG ATAAGCGACT GACTGGACGT
TGGCGCACCC ATGAATTAAG TAGTTCGGAT TCGCGTTTGG CTGCATGCGC TCAACCTGAG
CTCGACAGGC TGTGGGGAAT ATTCGGAGGG CAAGACTGGG CCCTGTTTTG CGTCAACCTC
GAAGGCGTGA TCGTTTATGC CAAGCACGCG TCCCAGCCCG ACCTTGTGGA CCCACTGAAA
GTGGGAAAGC GCGTCAATGA AGTGGATATC GGAACCACTG CGCCCAGTTG CACACTCCAT
GAGCAGCAGC CGTTTATCGT CTGCGGCGGT ATGCATTACT TAAAAGAATT TGAAAATTTT
TTCTGCGTAT CCGTTCCTGT TTTCGGTGTG CGTGGGGAGT TGGTGGGTGC AATCGACATA
ACCGGTATCG GCCAGCGCAA TGCGACTGCT GTTCTGGAGC AGCTAAAGAT CGCGTCCATG
GCCATCGAAA GCAGGTTGTA TTCGGGGTTG GTGGATTGCC AGATCGTAGC ACTTCAGTTT
GACGCGAGAT TGATCGGAAC ACCTTTCCAG GGATTGGTCG CTTTCGATCA GAATGGAAGG
TTCTGTGCCG CCAATAAAGT AGCGAAGAAG ATATTGGGCA TCGATGCTTC TTCGCCAGTC
GAGTCCTCAT TGGACTGGGA TAGTTTTTTT GAGCGTGGGC CACAGTCCAT AGTCGTGAAC
TCACCCAGTC TGATAGCGCT GAACGACGGG TCTTCGGTTT ATGCCCAGTC GTTATCGTTG
CCTGGCGGCG CTCAGCCTGC TGCTCGTTTG TGTCATACAT CCCCTGGGGT CGGACACGAT
CCTGCGCTCA ATCAGCAATT CAACATGGCC TCGAAAGCCT TCGCAGCTAG CATTCCCATC
ATCTTGCAAG GCGAAACGGG TACGGGAAAA GAGGTATTCG CCAGGGCACT TCACGACTCG
TTGAATCCTG GCGCTCCGTT CATAGCCATT AACTGTTCTG CCATACCTGA GAATTTGATT
GAATCGGAGT TGTTTGGCTA CGTTGAAGGA ACATTTACAG GGGCACGTCG AGGCGGTGCG
AAAGGTCGTA TCGAAGAAGC GCATGGCGGG ACATTATTGC TCGATGAGAT TGGCGATATG
CCGTTCAACC TTCAGACCAG GCTGCTTCGG GTACTGCAAG AGAGGGAAGT GACCCGTCTT
GGCAGCTCAG AACGACATCC AGTCAATATT AGGGTTATCA GCGCGACCCA TTGCGATATC
CATAAGCTTA TTGAGGAGCA TCGTTTCAGA GAGGATCTTT TTTATCGCCT CAATGGCATG
CAGGTTGGTA TTCCGGCGCT CCGTCAGCGG CAGGATATGG AAGATATCAT CACCAAATTG
ACCCAGCGCT ATCAGGGAGG CGCGATTCAT CCCGCCGCGT TGGAGCTGCT GAAGAACCAG
GAGTGGCGCG GAAATATCAG GCAACTGGAG CAGGTGATCC GGCTGGCTGT GGCTTTGGCT
GGCGCAGGGC TCGTGATCCT GCCGGAACAC TTTCCAGGGT TGGAGCAGCC TGAAGAGAAG
CGTGATGAGA AATCGTTAAA GGAATTTGAA AGGAAGAAGA TTCAAGACGC GCTGGATGCT
AATCGCGGCA ACGTGAAAGC GACTGCGCAG CAGCTCGGCG TTGCGCGTGG CACTATCTAT
CGTAAGCTGA GAATGGAATA G
 
Protein sequence
MLCNHMRLVI INDKNIQECG KVMSGQQMNI RDMHGLDEVR RRFLDGHSLP ADLLPTAVAN 
SWERSRKAGL SPWDKRLTGR WRTHELSSSD SRLAACAQPE LDRLWGIFGG QDWALFCVNL
EGVIVYAKHA SQPDLVDPLK VGKRVNEVDI GTTAPSCTLH EQQPFIVCGG MHYLKEFENF
FCVSVPVFGV RGELVGAIDI TGIGQRNATA VLEQLKIASM AIESRLYSGL VDCQIVALQF
DARLIGTPFQ GLVAFDQNGR FCAANKVAKK ILGIDASSPV ESSLDWDSFF ERGPQSIVVN
SPSLIALNDG SSVYAQSLSL PGGAQPAARL CHTSPGVGHD PALNQQFNMA SKAFAASIPI
ILQGETGTGK EVFARALHDS LNPGAPFIAI NCSAIPENLI ESELFGYVEG TFTGARRGGA
KGRIEEAHGG TLLLDEIGDM PFNLQTRLLR VLQEREVTRL GSSERHPVNI RVISATHCDI
HKLIEEHRFR EDLFYRLNGM QVGIPALRQR QDMEDIITKL TQRYQGGAIH PAALELLKNQ
EWRGNIRQLE QVIRLAVALA GAGLVILPEH FPGLEQPEEK RDEKSLKEFE RKKIQDALDA
NRGNVKATAQ QLGVARGTIY RKLRME