Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2976 |
Symbol | |
ID | 3712347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3415294 |
End bp | 3417174 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Fis family transcriptional regulator |
Protein accession | YP_348707 |
Protein GI | 77459201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATGTA ATCATATGCG GCTGGTCATT ATTAATGATA AAAACATACA AGAATGTGGA AAGGTAATGA GTGGTCAGCA AATGAATATA AGAGACATGC ATGGCCTTGA TGAGGTTCGG CGTCGCTTTC TGGATGGGCA CTCTTTGCCG GCGGATCTGC TGCCTACTGC AGTAGCCAAT TCTTGGGAGC GGTCCAGGAA AGCAGGGCTC TCACCTTGGG ATAAGCGACT GACTGGACGT TGGCGCACCC ATGAATTAAG TAGTTCGGAT TCGCGTTTGG CTGCATGCGC TCAACCTGAG CTCGACAGGC TGTGGGGAAT ATTCGGAGGG CAAGACTGGG CCCTGTTTTG CGTCAACCTC GAAGGCGTGA TCGTTTATGC CAAGCACGCG TCCCAGCCCG ACCTTGTGGA CCCACTGAAA GTGGGAAAGC GCGTCAATGA AGTGGATATC GGAACCACTG CGCCCAGTTG CACACTCCAT GAGCAGCAGC CGTTTATCGT CTGCGGCGGT ATGCATTACT TAAAAGAATT TGAAAATTTT TTCTGCGTAT CCGTTCCTGT TTTCGGTGTG CGTGGGGAGT TGGTGGGTGC AATCGACATA ACCGGTATCG GCCAGCGCAA TGCGACTGCT GTTCTGGAGC AGCTAAAGAT CGCGTCCATG GCCATCGAAA GCAGGTTGTA TTCGGGGTTG GTGGATTGCC AGATCGTAGC ACTTCAGTTT GACGCGAGAT TGATCGGAAC ACCTTTCCAG GGATTGGTCG CTTTCGATCA GAATGGAAGG TTCTGTGCCG CCAATAAAGT AGCGAAGAAG ATATTGGGCA TCGATGCTTC TTCGCCAGTC GAGTCCTCAT TGGACTGGGA TAGTTTTTTT GAGCGTGGGC CACAGTCCAT AGTCGTGAAC TCACCCAGTC TGATAGCGCT GAACGACGGG TCTTCGGTTT ATGCCCAGTC GTTATCGTTG CCTGGCGGCG CTCAGCCTGC TGCTCGTTTG TGTCATACAT CCCCTGGGGT CGGACACGAT CCTGCGCTCA ATCAGCAATT CAACATGGCC TCGAAAGCCT TCGCAGCTAG CATTCCCATC ATCTTGCAAG GCGAAACGGG TACGGGAAAA GAGGTATTCG CCAGGGCACT TCACGACTCG TTGAATCCTG GCGCTCCGTT CATAGCCATT AACTGTTCTG CCATACCTGA GAATTTGATT GAATCGGAGT TGTTTGGCTA CGTTGAAGGA ACATTTACAG GGGCACGTCG AGGCGGTGCG AAAGGTCGTA TCGAAGAAGC GCATGGCGGG ACATTATTGC TCGATGAGAT TGGCGATATG CCGTTCAACC TTCAGACCAG GCTGCTTCGG GTACTGCAAG AGAGGGAAGT GACCCGTCTT GGCAGCTCAG AACGACATCC AGTCAATATT AGGGTTATCA GCGCGACCCA TTGCGATATC CATAAGCTTA TTGAGGAGCA TCGTTTCAGA GAGGATCTTT TTTATCGCCT CAATGGCATG CAGGTTGGTA TTCCGGCGCT CCGTCAGCGG CAGGATATGG AAGATATCAT CACCAAATTG ACCCAGCGCT ATCAGGGAGG CGCGATTCAT CCCGCCGCGT TGGAGCTGCT GAAGAACCAG GAGTGGCGCG GAAATATCAG GCAACTGGAG CAGGTGATCC GGCTGGCTGT GGCTTTGGCT GGCGCAGGGC TCGTGATCCT GCCGGAACAC TTTCCAGGGT TGGAGCAGCC TGAAGAGAAG CGTGATGAGA AATCGTTAAA GGAATTTGAA AGGAAGAAGA TTCAAGACGC GCTGGATGCT AATCGCGGCA ACGTGAAAGC GACTGCGCAG CAGCTCGGCG TTGCGCGTGG CACTATCTAT CGTAAGCTGA GAATGGAATA G
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Protein sequence | MLCNHMRLVI INDKNIQECG KVMSGQQMNI RDMHGLDEVR RRFLDGHSLP ADLLPTAVAN SWERSRKAGL SPWDKRLTGR WRTHELSSSD SRLAACAQPE LDRLWGIFGG QDWALFCVNL EGVIVYAKHA SQPDLVDPLK VGKRVNEVDI GTTAPSCTLH EQQPFIVCGG MHYLKEFENF FCVSVPVFGV RGELVGAIDI TGIGQRNATA VLEQLKIASM AIESRLYSGL VDCQIVALQF DARLIGTPFQ GLVAFDQNGR FCAANKVAKK ILGIDASSPV ESSLDWDSFF ERGPQSIVVN SPSLIALNDG SSVYAQSLSL PGGAQPAARL CHTSPGVGHD PALNQQFNMA SKAFAASIPI ILQGETGTGK EVFARALHDS LNPGAPFIAI NCSAIPENLI ESELFGYVEG TFTGARRGGA KGRIEEAHGG TLLLDEIGDM PFNLQTRLLR VLQEREVTRL GSSERHPVNI RVISATHCDI HKLIEEHRFR EDLFYRLNGM QVGIPALRQR QDMEDIITKL TQRYQGGAIH PAALELLKNQ EWRGNIRQLE QVIRLAVALA GAGLVILPEH FPGLEQPEEK RDEKSLKEFE RKKIQDALDA NRGNVKATAQ QLGVARGTIY RKLRME
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