Gene Pfl01_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2969 
Symbol 
ID3712340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3406433 
End bp3407407 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348700 
Protein GI77459194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTAG TAATTGCAAC TTCGAGCCAT CTGCTCAGTG AGCGCAGTAG CATTTTTCGG 
GATGCGGATC CTTACGCGGT GTCCGACTAC GTGAACTTGC ACGTTGGATC CCATCGCATC
GGTCTCTCTC GAACCACCCA CCCCCAGGCC AGCCTGAACC ATCGAAAATT CGCCGGTCTC
GATCTGTGCC GCATCAGCTA CGGCGGAAGC GTGCGTGTCA CGTCGCCTGC GCTGGAAAGC
GTCTACCACC TTCAGGTGTT GCTTAGCGGC AATTGTTTGT GGCGAGGCTA TCAGCATGAG
CACTACCTGC TTCCGGGCGA ATTGCTGCTG ATCAATCCAG ACGATCCTGT CGACCTGACG
TACTCTCAAG ACTGCGAAAA ATTCATTGTT AAGTTGCCCG TTCAGTTGCT TGAATCGATA
TGTGATGAGC TGCGATGGTT GCGGCCTGCG ACGGGCATAC GTTTTCTGCG TAACCACTAT
CAGCTGGATG AGTTGGAAGG GTTTCTTGGC TTATTGGCGA TGATTTGCCA GGAGTCCGAG
GCCAGTACTC CGATCATGCG GGTACAAGAG CATTACGCCC AGATAGTCGG CAGCAAGCTG
CTTTCGCTCA TGACCACCAA CGTCAGCCGC GAAGGCGCAG GATCACAATC GGCCAGCTTC
GATCGCATTC TCGATTACAT AGACCGGAAT CTGAAACAGG ACTTGAACGC CGAGCACTTG
GCACAACAGG TCAGTATGAG CACCAGGTCC TTGTACGTAC TGTTCGAGCG CCACTTGGGT
ACCACACCCT TGCAGTACAT TCGCCAGCGC AAACTGGAAC GCATTCAAGC GTGCCTGAGC
GACCCGAGTT GCCCGGTCCG CAGCCTGACT GAAGTGGCGC TGGACTACGG TTTTCTTCAC
TTAGGCCGCT TCTCTGAGCT TTACCGTTCG CAGTTCGGCG AGCTTCCTTC GCAAACCCTC
AAATCACGCG TCTGA
 
Protein sequence
MTLVIATSSH LLSERSSIFR DADPYAVSDY VNLHVGSHRI GLSRTTHPQA SLNHRKFAGL 
DLCRISYGGS VRVTSPALES VYHLQVLLSG NCLWRGYQHE HYLLPGELLL INPDDPVDLT
YSQDCEKFIV KLPVQLLESI CDELRWLRPA TGIRFLRNHY QLDELEGFLG LLAMICQESE
ASTPIMRVQE HYAQIVGSKL LSLMTTNVSR EGAGSQSASF DRILDYIDRN LKQDLNAEHL
AQQVSMSTRS LYVLFERHLG TTPLQYIRQR KLERIQACLS DPSCPVRSLT EVALDYGFLH
LGRFSELYRS QFGELPSQTL KSRV