Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2968 |
Symbol | |
ID | 3712339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3404926 |
End bp | 3406284 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | benzoate 1,2-dioxygenase, alpha subunit |
Protein accession | YP_348699 |
Protein GI | 77459193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGG GAAACGATTA CCTGAATGCC CTGCTTGAAG AAGACAAGGA GAAGGGCATC TACCGTTGCA AACGGGAGAT GTTCACCGAT CCTCGTCTGT TCGAACTGGA GATGACGCAC ATCTTCGAAG GCAACTGGAT TTACCTTGCC CACGAAAGCC AGCTTCCCAA CAACAACGAC TTCTTGACCA CCACCATGGG GCGCCAGCCG ATTTTCATCG CGCGCAACAA GGACGGTGTA CTCAATGCCT TTCTCAACGC CTGTAGCCAC CGCGGCGCCA TGCTCTGCCG ACACAAATCC GGCAATCGTT CCAGCTACAC CTGCCCCTTT CACGGCTGGA CGTTCAACAA CAGCGGCAAG CTGCTCAAGG TCAAGGATCC GAGCGAGGCT GGATATCCCG AAAGCTTCAA TTGCGAGGGT TCCCATGACC TCACAAAAGT TGCTCGTTTC GAGTCCTATC GTGGGTTTCT TTTTGGCAGC CTGAACCCCA ACGTAAAGCC ATTGGCGGAA CACTTGGGCG AGTCATCCAA AATCATCGAT ATGATCGTGG ATCAATCGCC GGAAGGGTTG GAGGTGCTGC GTGGCTCCAG TTCCTATATC TACGAAGGCA ACTGGAAACT GACGGCCGAG AACGGAGCTG ACGGCTACCA TGTGAGCTCT GTTCACTGGA ACTACGCAGC GACCCAGAAC CAGCGTAAGC AACGCGAATC GGGCGAAGAA ATCAAAACCA TGAGCGCCGG TAGCTGGGCA AAAAACGGGG GTGGTTTCTA CTCCTTTGAC CACGGCCATT TGTTGCTCTG GACGCGTTGG GCTAACCCCG AAGATCGACC TGCCTACGAG CGTCGTGATG AGTTGGTACG TGACTTCGGA CAGGCCCGCG CCGATTGGAT GATCGAAAAC TCCCGCAACC TCTGCCTGTA CCCGAACGTG TATTTGATGG ACCAGTTCAG CTCGCAGATT CGCATCGCTC GGCCTATCTC GGTCGATAAG ACTGAAATTA CCATTTACTG CATTGCCCCC AAGGGTGAAA GCGCCGAGGC GCGCGCCAAG CGCATACGCC AATACGAAGA CTTCTTCAAC GTCAGCGGCA TGGCCACGCC GGATGATTTG GAAGAGTTCC GCTCCTGCCA GACTGGCTAC GGTGCTGGGC GTGGATGGAA CGACATGTCC CGTGGTGCAG AACATTGGGT CGAGGGCGCA GACACCGCCG CACAGGAAAT CGACCTCAAG CCGCTGCTCT CCGGCAAACG CACTGAAGAC GAGGGCCTGT TTGTCCTGCA ACACAAATAT TGGCAAGAAA CCATGCTCAA GGCCGCATCC ACCGAGCAGC CATTGATTCC AGTGGAGGCT GTGCAATGA
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Protein sequence | MSLGNDYLNA LLEEDKEKGI YRCKREMFTD PRLFELEMTH IFEGNWIYLA HESQLPNNND FLTTTMGRQP IFIARNKDGV LNAFLNACSH RGAMLCRHKS GNRSSYTCPF HGWTFNNSGK LLKVKDPSEA GYPESFNCEG SHDLTKVARF ESYRGFLFGS LNPNVKPLAE HLGESSKIID MIVDQSPEGL EVLRGSSSYI YEGNWKLTAE NGADGYHVSS VHWNYAATQN QRKQRESGEE IKTMSAGSWA KNGGGFYSFD HGHLLLWTRW ANPEDRPAYE RRDELVRDFG QARADWMIEN SRNLCLYPNV YLMDQFSSQI RIARPISVDK TEITIYCIAP KGESAEARAK RIRQYEDFFN VSGMATPDDL EEFRSCQTGY GAGRGWNDMS RGAEHWVEGA DTAAQEIDLK PLLSGKRTED EGLFVLQHKY WQETMLKAAS TEQPLIPVEA VQ
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