Gene Pfl01_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2968 
Symbol 
ID3712339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3404926 
End bp3406284 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content55% 
IMG OID 
Productbenzoate 1,2-dioxygenase, alpha subunit 
Protein accessionYP_348699 
Protein GI77459193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGG GAAACGATTA CCTGAATGCC CTGCTTGAAG AAGACAAGGA GAAGGGCATC 
TACCGTTGCA AACGGGAGAT GTTCACCGAT CCTCGTCTGT TCGAACTGGA GATGACGCAC
ATCTTCGAAG GCAACTGGAT TTACCTTGCC CACGAAAGCC AGCTTCCCAA CAACAACGAC
TTCTTGACCA CCACCATGGG GCGCCAGCCG ATTTTCATCG CGCGCAACAA GGACGGTGTA
CTCAATGCCT TTCTCAACGC CTGTAGCCAC CGCGGCGCCA TGCTCTGCCG ACACAAATCC
GGCAATCGTT CCAGCTACAC CTGCCCCTTT CACGGCTGGA CGTTCAACAA CAGCGGCAAG
CTGCTCAAGG TCAAGGATCC GAGCGAGGCT GGATATCCCG AAAGCTTCAA TTGCGAGGGT
TCCCATGACC TCACAAAAGT TGCTCGTTTC GAGTCCTATC GTGGGTTTCT TTTTGGCAGC
CTGAACCCCA ACGTAAAGCC ATTGGCGGAA CACTTGGGCG AGTCATCCAA AATCATCGAT
ATGATCGTGG ATCAATCGCC GGAAGGGTTG GAGGTGCTGC GTGGCTCCAG TTCCTATATC
TACGAAGGCA ACTGGAAACT GACGGCCGAG AACGGAGCTG ACGGCTACCA TGTGAGCTCT
GTTCACTGGA ACTACGCAGC GACCCAGAAC CAGCGTAAGC AACGCGAATC GGGCGAAGAA
ATCAAAACCA TGAGCGCCGG TAGCTGGGCA AAAAACGGGG GTGGTTTCTA CTCCTTTGAC
CACGGCCATT TGTTGCTCTG GACGCGTTGG GCTAACCCCG AAGATCGACC TGCCTACGAG
CGTCGTGATG AGTTGGTACG TGACTTCGGA CAGGCCCGCG CCGATTGGAT GATCGAAAAC
TCCCGCAACC TCTGCCTGTA CCCGAACGTG TATTTGATGG ACCAGTTCAG CTCGCAGATT
CGCATCGCTC GGCCTATCTC GGTCGATAAG ACTGAAATTA CCATTTACTG CATTGCCCCC
AAGGGTGAAA GCGCCGAGGC GCGCGCCAAG CGCATACGCC AATACGAAGA CTTCTTCAAC
GTCAGCGGCA TGGCCACGCC GGATGATTTG GAAGAGTTCC GCTCCTGCCA GACTGGCTAC
GGTGCTGGGC GTGGATGGAA CGACATGTCC CGTGGTGCAG AACATTGGGT CGAGGGCGCA
GACACCGCCG CACAGGAAAT CGACCTCAAG CCGCTGCTCT CCGGCAAACG CACTGAAGAC
GAGGGCCTGT TTGTCCTGCA ACACAAATAT TGGCAAGAAA CCATGCTCAA GGCCGCATCC
ACCGAGCAGC CATTGATTCC AGTGGAGGCT GTGCAATGA
 
Protein sequence
MSLGNDYLNA LLEEDKEKGI YRCKREMFTD PRLFELEMTH IFEGNWIYLA HESQLPNNND 
FLTTTMGRQP IFIARNKDGV LNAFLNACSH RGAMLCRHKS GNRSSYTCPF HGWTFNNSGK
LLKVKDPSEA GYPESFNCEG SHDLTKVARF ESYRGFLFGS LNPNVKPLAE HLGESSKIID
MIVDQSPEGL EVLRGSSSYI YEGNWKLTAE NGADGYHVSS VHWNYAATQN QRKQRESGEE
IKTMSAGSWA KNGGGFYSFD HGHLLLWTRW ANPEDRPAYE RRDELVRDFG QARADWMIEN
SRNLCLYPNV YLMDQFSSQI RIARPISVDK TEITIYCIAP KGESAEARAK RIRQYEDFFN
VSGMATPDDL EEFRSCQTGY GAGRGWNDMS RGAEHWVEGA DTAAQEIDLK PLLSGKRTED
EGLFVLQHKY WQETMLKAAS TEQPLIPVEA VQ