Gene Pfl01_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2966 
Symbol 
ID3712337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3403365 
End bp3404378 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content57% 
IMG OID 
Productbenzoate 1,2-dioxygenase ferredoxin reductase subunit 
Protein accessionYP_348697 
Protein GI77459191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCC AGATCGCATT GAATTTTGAA GACGGGATCA CCCGCTTCAT TGAGGCCCAG 
GGGCACGAAA CCGTCGCTGA TGCGGCGTAT CGCCAAGGCA TCAACATCCC GCTGGACTGC
CGTGACGGCG CCTGCGGCAC CTGCAAATGT TTCGCCGAGG CCGGGCGTTA CGACATGGGT
GACAACTTCA TCGAAGACGC CCTGAGCGAA GACGAGCTCA CCCAAGGTTA CGTGCTGACG
TGCCAGATGC GCGCTCAGAG CGATTGCGTC GTGCGGGTGC CCGCAGCTTC GCAAGTCTGC
AAGACTGAAC AGGAGAGTTT TCAGGCATCG ATCAGCGATG TGCGACAACT GTCTGAAAGC
ACAATCGCGC TATCGATCAA GGGCGATTGC CTGAACAAGC TGGCGTTCCT GCCGGGCCAA
TACGTCAACT TACAAGTACC CGGTAGCGAA CAGACACGCG CCTATTCTTT CAGCTCGTTG
CAGAAAGACG GTGAGGTCAG CTTCTTGATC CGTAACGTAA CGGGCGGCCT GATGAGCAGT
TTCCTGACCG GCCTGGCCAA GGCCGGCGAC AGCATGAACC TGGCCGGCCC TTTGGGCAGT
TTCTACCTGC GTGAAATCAA GCGACCACTG CTGCTGCTCG CTGGCGGCAC CGGGCTGGCG
CCATTCACAG CCATGTTGGA AAAAATCGCG GAGCAGGGCA GTGAGCATCC GGTGCACCTG
ATCTATGGCG TAACCAATGA TTTCGATTTG GTCGAGTTGG ATCGGTTGGA GGCTTTCGTT
GCACGCATTC CCAACTTCAG TTTTCGCGCC TGTGTGGCCA ATCCGCAAAG TACTTATCCG
TTCAAGGGCT ATGTCACTCA GCACATCGAG CCCTGTCATC TCAATGGGGG CGAGGTAGAC
GTTTATTTGT GCGGCCCGCC ACCGATGGTC GAAGCGGTCA ACCATTACAT CCGCGAGCAA
GGGATTAACC CTGCCAATTT CTATTTCGAG AAGTTCGCGC CTGCCGCGGC CTGA
 
Protein sequence
MSFQIALNFE DGITRFIEAQ GHETVADAAY RQGINIPLDC RDGACGTCKC FAEAGRYDMG 
DNFIEDALSE DELTQGYVLT CQMRAQSDCV VRVPAASQVC KTEQESFQAS ISDVRQLSES
TIALSIKGDC LNKLAFLPGQ YVNLQVPGSE QTRAYSFSSL QKDGEVSFLI RNVTGGLMSS
FLTGLAKAGD SMNLAGPLGS FYLREIKRPL LLLAGGTGLA PFTAMLEKIA EQGSEHPVHL
IYGVTNDFDL VELDRLEAFV ARIPNFSFRA CVANPQSTYP FKGYVTQHIE PCHLNGGEVD
VYLCGPPPMV EAVNHYIREQ GINPANFYFE KFAPAAA