Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2959 |
Symbol | |
ID | 3712369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3396560 |
End bp | 3397315 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | cytochrome c-type biogenesis protein CcmC |
Protein accession | YP_348690 |
Protein GI | 255961274 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTGGA ACTGGTTTCA TAAGCTCGGC TCACCCAAGT GGTTCTACGG CATCAGCGGC AAACTGCTGC CCTGGCTGAG CATCGCCGCC GTGCTGCTGA TTGGCAGCGG CGTGGTCTGG GGCCTGGCTT TCGCGCCACC GGATTACCAG CAGGGCAACA GTTTCCGCAT CATCTACATC CACGTTCCCA CGGCGGTGCT GGCCCAGTCC ATCTACGTGA TGCTGGCGGT GTGCGGTGTG GTGGGGCTGG TCTGGAAGAT GAAGCTGGCT GACGTGGCCC TGCAGTGCGC CGCCCCCATC GGCGCCTGGA TGACCGCCGT GGCGCTGGTC ACCGGCGCCA TATGGGGCAG GCCGACCTGG GGTTCATGGT GGGTCTGGGA TGCCCGACTG ACGTCGATGC TGATCCTGCT GTTCCTGTAC TTCGGTCTCA TTGCGCTGGG CAACGCCATC AGCAATCGTG ACAGCGCCGC CAAGGCATGC GCGGTGTTGG CGATTGTCGG GGTGATCAAC ATCCCGATCA TCAAGTACTC GGTGGAGTGG TGGAACACCC TGCACCAGGG CGCGACGTTC ACCCTCACCG AAAAGCCGGC GATGCCCGTG GAAATGTGGC TGCCGCTGTT GCTCACCGTA TTGGGCTTCT ACTGTTTCTT CGGCGCGGTG CTGTTGCTGC GCATGCGCCT CGAAGTGCTC AAGCGCGAAG CCCGCGCCAG TTGGATGAAG GCCGAATTAC AGAACAGCCT GGAGGCCGCT CGATGA
|
Protein sequence | MNWNWFHKLG SPKWFYGISG KLLPWLSIAA VLLIGSGVVW GLAFAPPDYQ QGNSFRIIYI HVPTAVLAQS IYVMLAVCGV VGLVWKMKLA DVALQCAAPI GAWMTAVALV TGAIWGRPTW GSWWVWDARL TSMLILLFLY FGLIALGNAI SNRDSAAKAC AVLAIVGVIN IPIIKYSVEW WNTLHQGATF TLTEKPAMPV EMWLPLLLTV LGFYCFFGAV LLLRMRLEVL KREARASWMK AELQNSLEAA R
|
| |