Gene Pfl01_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2952 
Symbol 
ID3712362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3391795 
End bp3392994 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID 
ProductTonB-dependent receptor 
Protein accessionYP_348683 
Protein GI77459177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGTGG CTGGTGAGAT AGCGGCTACT CGCTTTGGTG CAGCGGCTTT TAAACGGGCA 
AACGCTGCAA TCGGCGATGG TCGCCAAAGG CACGATCAGG AGTTCAACGG TGACCGTATC
GAGCCGACTC AGCAGGCTCA ACTGTTCGGC CGGGCCAGCG ATTGGGCCTT GGGCGTGGAT
TACAACACCA ATCAGCAAAC CAGCTACCCA TTGTCCAAAG GCGCCTTCGA CACTATCGAT
CCAGGTGGCT TCGAGCCGGG CCACTTCCTG GATATTCCAG GTATGGATCC GCCGCGCAGT
AAAGGTCGCA GCACCTGGAC TGATACCACG TCAGTTTTCC TCGAGAACCG TAGGCGTCTG
ACCGAGCGAC TGGCGCTAAT TACTGCGTTG CGCTATGACC ATATCGACTT CGAGGTCGTC
GATCATGCGG CGCAGGCCAG GCTCGACAAA CGTTGGGATG CAGTCACGTG TCGCCTGGGT
CTGGTGTACG GCCTGACGTC GAATGTCAGC CTTTATAACC AATACAGTAC GTCAGCCGAG
CCGCCGGGAG GTACGCTTAC CGGCGCCTCC GTTTCCCAAG TGGGTGACTT CGATTTGAGC
ACCGGCCGCC AAATCGAGGT GGGCAGCAAG TTCGATTTTC TTGACGGTCG CGGCTCGGCC
ACTGCGGCGG CCTACCGCAT CGTGCGCAAG AACATCTCCG TCCCCTCTTC TACGGTGCCC
AACACCACCG AACAAGCAGG TCAGCAGACT TCGACCGGCA TCGAGATCGC GACTTCGTTC
AAGATCACTC CCAAGCTATT GGCCGCCGGT AACTTCAGCT GGGTCAGGGC CGAGTACGAC
GAATTCAATG AAAACATCGC AGGCGTCGTT TACTCGCGCA AAGGCAAGAA TCCGGCGAAC
ATTTCAGACC GCGTAGCCAA TCTCTGGTTG ATCTATGACG TGGCTCCCGA CTGGCAACTC
GGGGCCGACG CACGTTACGT GTCGTCGGTC TACGCCAATA CGGCCAATAC GACGTGGGTG
CCCTCGAACA CCGTCTATGG TTTGCCCATG ACTCACGACC TGGACAAACA CATGCAGCTC
AGCGCGCGTC TGCGTAACCT GAACGACGAG GTCTATGCTC GTTTCATTCA CCAGAGCAAC
CCCCAATATT ACCTAGGGGA GCCGCGCAGC CTGGAAATCG CTGTGCAGTG GAGCTACTGA
 
Protein sequence
MSVAGEIAAT RFGAAAFKRA NAAIGDGRQR HDQEFNGDRI EPTQQAQLFG RASDWALGVD 
YNTNQQTSYP LSKGAFDTID PGGFEPGHFL DIPGMDPPRS KGRSTWTDTT SVFLENRRRL
TERLALITAL RYDHIDFEVV DHAAQARLDK RWDAVTCRLG LVYGLTSNVS LYNQYSTSAE
PPGGTLTGAS VSQVGDFDLS TGRQIEVGSK FDFLDGRGSA TAAAYRIVRK NISVPSSTVP
NTTEQAGQQT STGIEIATSF KITPKLLAAG NFSWVRAEYD EFNENIAGVV YSRKGKNPAN
ISDRVANLWL IYDVAPDWQL GADARYVSSV YANTANTTWV PSNTVYGLPM THDLDKHMQL
SARLRNLNDE VYARFIHQSN PQYYLGEPRS LEIAVQWSY