Gene Pfl01_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2945 
Symbol 
ID3712513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3387095 
End bp3388720 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content60% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_348676 
Protein GI77459170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACG TCTCGCGTAC GCCTGCTCTC GTCTCCCTGA ATCAACTGGG TTTTCAGTTC 
GCCAATGGCG AGACGATTTT CACTGCACTC AATCTGAAAT TCGATCACAC CCCGACCGCC
ATTGTCGGGC GCAACGGCGT TGGCAAAAGC ATTTTGGCGC GTCTGATCGC CGGAGTATGG
CAACCCACCA GCGGCAGCGT GACGCGTACC GTGGCGACAA CCTACGTGGC GCAAACCTTT
GTCGCGACAC CCGGCGAGAC GGTCGCCGAG TCCACCGGCA GCGCCGCGAT TCTTCAGGCG
CTGGAGCGAA TGAACCGGGG TTGCGGATCA GTCGAGGATT TCGATCTCAT TGGCGAGCAA
TGGGATCTGG CGGACCGACT GCGCCGCCTG CTCGATGACG CCGGGCTGAC AGAGATTTCT
TTCACCGACG AGACTGGCAA ACTCAGTGGC GGCCAGCAAG CACGTGTTGC CCTGATTGGG
GCATTGTTGA GTCGTGCGTC GTTACTGATT CTGGATGAAC CGACCAACCA TCTGGATACA
TCAGGACGGA AATGGCTGAT GAACTCATTG GAACGCTGGC ACACCGGTTT GATCGTCGTC
AGCCATGATC GGCAATTGCT CGACCGGATG CAGCGGATCG TCGAGTTGAG CGCATCGGGT
GCAATAGAAT TCGGCGGCAA TTACTCGGCA TTCCGCGAAC ATCAGCGAAT TCATCAAGCC
GCGGCGCAAG CACGTCTCGA CCACGCCAGA AGCGAACGTC AGCGCGAGCG GATTCGGCTA
CGACGCGAGC ACGACACGAT ACAGCGACAC GCTGCCAACT CTCGACGCAA CGCCGAAACC
GCCAACATTG CCAGTTTCGA ATACGTGGCG ATCAAGGGCG CCGCCCGGGA GATCATGGGG
CATGTCCGTC GGGGTCATCA GGCCCGCAAG TCCGAACTGG ATGCCCAGGT GCGCGAAGCT
TACGCCAAGG TGCAGCCCGA GGACGGCGTG CTGATTAACT TGCCTGCCAG CGCGGTGCCG
AACAACCGCC AGATCTGTAC GTTGATTGAC GCTCGGCTGC CCTGGCTGTC GAGCGATGCA
CTGAATCTGA CGATCCATGG CCCGATGCGG ATCGCTGTCA GCGGGCCCAA CGGCTGCGGC
AAATCAACGC TGTTGAAAGT GCTCGCCGGG GAACTGATGC CCGTCGATGG AACCGCCGCG
ACTCACGTGC CCTTCGCATT CCTGGATCAG CAACTGGCCC AACTAAACGA TCAGCGCTCC
ATTACCGAAC AGCTGATGAT GCAAGGTACT GCACTGACCG AGGGCACCCT GCGCAGCTAT
CTCGCGCACT TGCAGCTGGA TGCGAGCCGC GCCACGGCCC CTTGCGCTTC GTTGAGCGGT
GGCGAGCGCC TGAAAGCCGC ACTGGCGCTG GCTTTGTGGC GAACGGATCC TGCGCAGCTG
TTGCTGCTGG ATGAGCCGAC CAACCATCTG GATCTGCCGT CGGTGGAAGC GTTCGAACGG
GCGTTGCAGT CATTTCCGGG TGCCATTGTC GCCGTTTCCC ACGATCAGGA CTTCCTTGAG
GCATTGAATC CGACCCACCA CCTGCGCCGG CACCCATCAG GCTGGCAACT GCACCCGACG
AACTGA
 
Protein sequence
MTHVSRTPAL VSLNQLGFQF ANGETIFTAL NLKFDHTPTA IVGRNGVGKS ILARLIAGVW 
QPTSGSVTRT VATTYVAQTF VATPGETVAE STGSAAILQA LERMNRGCGS VEDFDLIGEQ
WDLADRLRRL LDDAGLTEIS FTDETGKLSG GQQARVALIG ALLSRASLLI LDEPTNHLDT
SGRKWLMNSL ERWHTGLIVV SHDRQLLDRM QRIVELSASG AIEFGGNYSA FREHQRIHQA
AAQARLDHAR SERQRERIRL RREHDTIQRH AANSRRNAET ANIASFEYVA IKGAAREIMG
HVRRGHQARK SELDAQVREA YAKVQPEDGV LINLPASAVP NNRQICTLID ARLPWLSSDA
LNLTIHGPMR IAVSGPNGCG KSTLLKVLAG ELMPVDGTAA THVPFAFLDQ QLAQLNDQRS
ITEQLMMQGT ALTEGTLRSY LAHLQLDASR ATAPCASLSG GERLKAALAL ALWRTDPAQL
LLLDEPTNHL DLPSVEAFER ALQSFPGAIV AVSHDQDFLE ALNPTHHLRR HPSGWQLHPT
N