Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2945 |
Symbol | |
ID | 3712513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3387095 |
End bp | 3388720 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_348676 |
Protein GI | 77459170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCACG TCTCGCGTAC GCCTGCTCTC GTCTCCCTGA ATCAACTGGG TTTTCAGTTC GCCAATGGCG AGACGATTTT CACTGCACTC AATCTGAAAT TCGATCACAC CCCGACCGCC ATTGTCGGGC GCAACGGCGT TGGCAAAAGC ATTTTGGCGC GTCTGATCGC CGGAGTATGG CAACCCACCA GCGGCAGCGT GACGCGTACC GTGGCGACAA CCTACGTGGC GCAAACCTTT GTCGCGACAC CCGGCGAGAC GGTCGCCGAG TCCACCGGCA GCGCCGCGAT TCTTCAGGCG CTGGAGCGAA TGAACCGGGG TTGCGGATCA GTCGAGGATT TCGATCTCAT TGGCGAGCAA TGGGATCTGG CGGACCGACT GCGCCGCCTG CTCGATGACG CCGGGCTGAC AGAGATTTCT TTCACCGACG AGACTGGCAA ACTCAGTGGC GGCCAGCAAG CACGTGTTGC CCTGATTGGG GCATTGTTGA GTCGTGCGTC GTTACTGATT CTGGATGAAC CGACCAACCA TCTGGATACA TCAGGACGGA AATGGCTGAT GAACTCATTG GAACGCTGGC ACACCGGTTT GATCGTCGTC AGCCATGATC GGCAATTGCT CGACCGGATG CAGCGGATCG TCGAGTTGAG CGCATCGGGT GCAATAGAAT TCGGCGGCAA TTACTCGGCA TTCCGCGAAC ATCAGCGAAT TCATCAAGCC GCGGCGCAAG CACGTCTCGA CCACGCCAGA AGCGAACGTC AGCGCGAGCG GATTCGGCTA CGACGCGAGC ACGACACGAT ACAGCGACAC GCTGCCAACT CTCGACGCAA CGCCGAAACC GCCAACATTG CCAGTTTCGA ATACGTGGCG ATCAAGGGCG CCGCCCGGGA GATCATGGGG CATGTCCGTC GGGGTCATCA GGCCCGCAAG TCCGAACTGG ATGCCCAGGT GCGCGAAGCT TACGCCAAGG TGCAGCCCGA GGACGGCGTG CTGATTAACT TGCCTGCCAG CGCGGTGCCG AACAACCGCC AGATCTGTAC GTTGATTGAC GCTCGGCTGC CCTGGCTGTC GAGCGATGCA CTGAATCTGA CGATCCATGG CCCGATGCGG ATCGCTGTCA GCGGGCCCAA CGGCTGCGGC AAATCAACGC TGTTGAAAGT GCTCGCCGGG GAACTGATGC CCGTCGATGG AACCGCCGCG ACTCACGTGC CCTTCGCATT CCTGGATCAG CAACTGGCCC AACTAAACGA TCAGCGCTCC ATTACCGAAC AGCTGATGAT GCAAGGTACT GCACTGACCG AGGGCACCCT GCGCAGCTAT CTCGCGCACT TGCAGCTGGA TGCGAGCCGC GCCACGGCCC CTTGCGCTTC GTTGAGCGGT GGCGAGCGCC TGAAAGCCGC ACTGGCGCTG GCTTTGTGGC GAACGGATCC TGCGCAGCTG TTGCTGCTGG ATGAGCCGAC CAACCATCTG GATCTGCCGT CGGTGGAAGC GTTCGAACGG GCGTTGCAGT CATTTCCGGG TGCCATTGTC GCCGTTTCCC ACGATCAGGA CTTCCTTGAG GCATTGAATC CGACCCACCA CCTGCGCCGG CACCCATCAG GCTGGCAACT GCACCCGACG AACTGA
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Protein sequence | MTHVSRTPAL VSLNQLGFQF ANGETIFTAL NLKFDHTPTA IVGRNGVGKS ILARLIAGVW QPTSGSVTRT VATTYVAQTF VATPGETVAE STGSAAILQA LERMNRGCGS VEDFDLIGEQ WDLADRLRRL LDDAGLTEIS FTDETGKLSG GQQARVALIG ALLSRASLLI LDEPTNHLDT SGRKWLMNSL ERWHTGLIVV SHDRQLLDRM QRIVELSASG AIEFGGNYSA FREHQRIHQA AAQARLDHAR SERQRERIRL RREHDTIQRH AANSRRNAET ANIASFEYVA IKGAAREIMG HVRRGHQARK SELDAQVREA YAKVQPEDGV LINLPASAVP NNRQICTLID ARLPWLSSDA LNLTIHGPMR IAVSGPNGCG KSTLLKVLAG ELMPVDGTAA THVPFAFLDQ QLAQLNDQRS ITEQLMMQGT ALTEGTLRSY LAHLQLDASR ATAPCASLSG GERLKAALAL ALWRTDPAQL LLLDEPTNHL DLPSVEAFER ALQSFPGAIV AVSHDQDFLE ALNPTHHLRR HPSGWQLHPT N
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