Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2938 |
Symbol | |
ID | 3712506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3379813 |
End bp | 3380886 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_348669 |
Protein GI | 77459163 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC TTTCAACCTC GCTGAGCACT GAAGACGATC CACGCTGGGC GGCTGTCGTG GCACGCGACC CTCGGGCGGA CGGCCAGTTT GTCTATGCCG TGAAAACCAC CGGCATCTAT TGCCGCCCCA GCAGTCTGGC GCGCTTGCCG AAACCGCAGA ACGTCGAGTT CTTCGATACC GCCGAGGACG CCGAAGCCGC GGGCTATCGC CCCAGCAAAC GGGCGAGCAA GGATCAGACC GAAGTCGCAG CGCAGCACGC CGCTACCGTT GCGGCAGCCT GTCGCCAGAT CGAAGCGTCG GACAGCCTGC CGGCGCTCAA CGATCTCGCC GAGACCGCCG GCCTGAGCGC CTTCCATTTT CACCGGGTCT TCAAAGCCGC AACGGGCCTG ACGCCCAAAG GCTATGCCGC CGCGCATCGC TCGCGTCGGG TTCGCCAGCG TCTGGCGGAC GGTAGCTCAG TGACGGAGGC GCTGTATGAC GCCGGTTTCA ATTCCAACAG CCGGTTCTAC GAGGCGGCCG ATCAGGTGCT GGGCATGAAA CCCGGCGACT TCCGATCCGC CGGGCAGAAC AACGACATCC GCTTCGCCGT CGGCCAGTGC TCGCTCGGCG CCATTCTGGT GGCGCAGAGC GAGCGCGGGA TCTGCGCGAT TCTGCTGGGG GACGATCCGC ACCAATTGGT GTGCGACCTG CAGGACCAGT TTCGCCGGGC CAACCTGATC GGCGCCGACA CCGAGTTCGA ACAACTGATC GCGCGCGTCG TCGGCTTCAT CGAAGCGCCT GCCATCGGCC TGGATTTGCC GCTGGATGTG CGCGGCACGG CGTTTCAGGA ACGGGTGTGG CAGGCACTGC GCGAAATACC GGTCGGCAGC ACCGCCAGCT ATGCGGACAT CGCCTTGCGT ATCGGCTCAC CAAAAGCCGT ACGCGCAGTG GCCCAGGCTT GCGGCGCCAA CAGCCTGGCG GTAGCGATCC CCTGTCATCG CGTTGTGCGC AGTGACGGCA ATCTGTCGGG CTACCGCTGG GGCGTGGAGC GCAAGCGCGA ATTGCTCGAG CGTGAAGGCA AACCACGGCA GTAA
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Protein sequence | MKTLSTSLST EDDPRWAAVV ARDPRADGQF VYAVKTTGIY CRPSSLARLP KPQNVEFFDT AEDAEAAGYR PSKRASKDQT EVAAQHAATV AAACRQIEAS DSLPALNDLA ETAGLSAFHF HRVFKAATGL TPKGYAAAHR SRRVRQRLAD GSSVTEALYD AGFNSNSRFY EAADQVLGMK PGDFRSAGQN NDIRFAVGQC SLGAILVAQS ERGICAILLG DDPHQLVCDL QDQFRRANLI GADTEFEQLI ARVVGFIEAP AIGLDLPLDV RGTAFQERVW QALREIPVGS TASYADIALR IGSPKAVRAV AQACGANSLA VAIPCHRVVR SDGNLSGYRW GVERKRELLE REGKPRQ
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