Gene Pfl01_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2929 
Symbol 
ID3712497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3375159 
End bp3375998 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID 
ProductUDP-glucose pyrophosphorylase 
Protein accessionYP_348660 
Protein GI77459154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0992187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA AATGCTTGTT CCCAGCAGCC GGTTACGGTA CTCGCTTCCT CCCAGCGACT 
AAGGCCATGC CCAAAGAAAT GCTGCCGGTG GTAAACAAGC CACTGATCCA GTACGGCGTC
GAAGAAGCTC TGGATGCTGG CCTGAACGAA ATCTCCATCG TGACCGGCCG TGGCAAGCGC
GCCCTGGAAG ACCACTTCGA TATCAGCTAT GAGCTGGAAA ACCAGATCAA AGGCACCGAC
AAGGAAAAAT ACCTGGTCGG TATCCGCAAG CTGCTGGACG AGTGCTCGTT CTCCTACACC
CGTCAGACCG AAATGAAAGG CCTGGGCCAC GCGATCCTGA CCGGCCGCCC GCTGATCGGT
GACGAGCCGT TCGCCGTGGT GCTGGCGGAC GACCTGTGCG TCAACCTTGA AGGCGACGGC
GTGCTGACCC AGATGGTCAA GCTGTACAAG CAGTTCCGCT GCTCGATCAT TGCCATCCAG
GAAGTCGATC CGCAGGAAAC CAGCAAGTAC GGCGTGATCG CTGGCGAAAT GATCCGCGAC
GACATCTACC GCGTACACAG CATGGTCGAG AAGCCAAAGC CGGAAGACGC ACCGTCGAAC
CTGGCGATCA TCGGCCGTTA CATCCTGACC CCGGACATCT TCGACCTGAT CGAACAGACC
GAGCCAGGCA AGGGAGGTGA AATCCAGATC ACCGACGCCC TGATGAAGCA AGCCCAGAAC
GGCTGCGTGA TGGCCTACAA GTTCAAGGGC AAGCGTTTCG ACTGCGGTGG TGCTGAAGGC
TACATCGAAG CAACCAACTT CTGCTTCGAG AACTTCTACA AGACTGGCAA GGCTTACTGA
 
Protein sequence
MIKKCLFPAA GYGTRFLPAT KAMPKEMLPV VNKPLIQYGV EEALDAGLNE ISIVTGRGKR 
ALEDHFDISY ELENQIKGTD KEKYLVGIRK LLDECSFSYT RQTEMKGLGH AILTGRPLIG
DEPFAVVLAD DLCVNLEGDG VLTQMVKLYK QFRCSIIAIQ EVDPQETSKY GVIAGEMIRD
DIYRVHSMVE KPKPEDAPSN LAIIGRYILT PDIFDLIEQT EPGKGGEIQI TDALMKQAQN
GCVMAYKFKG KRFDCGGAEG YIEATNFCFE NFYKTGKAY