Gene Pfl01_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2927 
Symbol 
ID3712495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3372670 
End bp3373674 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content58% 
IMG OID 
Productcointegrate resolution protein T 
Protein accessionYP_348658 
Protein GI77459152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0440763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTG GCGGCGTTAA CAAAGCAGTA GTCCAGATCG CGCGCGCAGC GATCCTCGCC 
CGTGGCGAAC ACCCCAGTAT CGATGCAGTA CGCATCGAGC TGGGCAATAC GGGCTCAAAA
ACCACGATTC ATCGCTATCT AAAAGAACTG GATGACGGCA GCGAGCCAGC GGATCCGTCG
GCAGAACCCA TCGATGACGA ACTGCTGGCG CTCGTCACCC GCCTTGCACA ACGCCTGAAA
GAACAGGCGC AAGAGCCGAT TGATCAGGCA CGCGAGCAGT ACGAGCAACA GCGTCAGGCA
CTGGAGGACG AACTGAATCA GCTTCGTCAG GATCATGCGC AACTGGAGAA GAAACACGAC
ATTCAAACTG CCGCGCTGGC CAAGGAATCC GAAGCACTGA GTGATACACG CTCAATGCTG
CAGACCGAGC AGACGCGCAA CGCCGGGTTG AATCAGGCAC TGGCGGATTT TGAATTGCGC
CTGCAGGACA AGGACGAGCA GATCCGCTCG CTGGAAGAGA AGCACCTGCA CGCCCGCGAT
GCACTTGAGC ACTATCGCAA CGCCATCAAG GAGCAGCGCG AGCAGGAGCA AAGCCGCCAT
GAAAACCAGG TGCAACAATT GCAGATGGAG TTGCGTCAGG CGCAACAAAG CGCCCTGGTG
CGCCAGGACG AAATCACCCA GCTGCACCGC GACAACGAAC GCCTGCTGAC CGAGAATCGC
GGCACCGTGC GCGAACTGAG TCTGATGCAG GATCAGCTCA AGCACAGCAA TCAGCGTCAG
GATCAACTGC TGGAGCAAGC GTCGCGCGTC GACAGCGAAC GCACCCTCCT CCAGGAACGC
CTGCGCGTGG CCCTGCTGGA AAGTCAGACG CTTAAACAGA ACGTCGACGA GCAGTCGCAG
CTCAATCAGT CATTGGAGAA GGAATTGACT AAGATTCAAG CCAGCTTGCG CCTGGCCACT
GCCGTTGTGG CAGCGCCAGA CGCAGCAGAA CCGGAAAAGA CTTAA
 
Protein sequence
MARGGVNKAV VQIARAAILA RGEHPSIDAV RIELGNTGSK TTIHRYLKEL DDGSEPADPS 
AEPIDDELLA LVTRLAQRLK EQAQEPIDQA REQYEQQRQA LEDELNQLRQ DHAQLEKKHD
IQTAALAKES EALSDTRSML QTEQTRNAGL NQALADFELR LQDKDEQIRS LEEKHLHARD
ALEHYRNAIK EQREQEQSRH ENQVQQLQME LRQAQQSALV RQDEITQLHR DNERLLTENR
GTVRELSLMQ DQLKHSNQRQ DQLLEQASRV DSERTLLQER LRVALLESQT LKQNVDEQSQ
LNQSLEKELT KIQASLRLAT AVVAAPDAAE PEKT