Gene Pfl01_2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2926 
Symbol 
ID3712690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3371554 
End bp3372492 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPhage integrase 
Protein accessionYP_348657 
Protein GI77459151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0537176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TCGATCGCTA TCTGCAAGCC GCCACCCGCG ACAACACCCG CCGCAGTTAT 
CGCGCGGCCA TCGAGCACTT CGAATCCGCG TGGGGAGGGT TCCTGCCGGC CACAGCGGAC
AGCGTCGCGC GGTATCTGGT GGCGCATGCG GGCGTGCTGT CGGTCAACAC GCTGAAGTTG
CGTCTGTCGG CACTGGCGCA GTGGCACAAC AGCCAGGGCT TCGCCGATCC CACCAAGTCG
CCGGTGGTGC GCAAGGTGTT CAAGGGCATT CGCGCCCTGC ATCCCGCGCA GGAAAAACAG
GCCGAGCCAC TCCAACTGCG CGATCTTGAG CAGACCGTCG CCTGGCTTGA GCAGGAAATG
AAAGACGCCC GGGAACAACA GGACCGGCCG CTGCTGCTCC GAGCTTGCCG TGATCGGGCG
TTGATCCTGC TGGGCTTCTG GCGCGGCTTC CGCAGCGATG AGCTGTGTCG GGTGCAGATC
GAGCATGTGC AGGCGCACGC CGGCAACGGC ATCACCTTGT ACCTGCCGCG CAGCAAGGGC
GATCGGGAAA ACCTCGGGCA GACCTATCAG GCCCCGGCGC TGCTGAAGTT GTGTCCGGTG
CAGGCTTATA TCGAGTGGAT CACCGAGGCA GCACTGGTGC GAGGACCGGT GTTTCGCGCC
GTCGACCGCT GGGGCAACCT GAGCGAAGAG GGGTTGCACG CCAACAGCGT GATTCCGTTG
CTGCGTCAGG CCCTGGAGCG AGCCGGGATC TCCGCCGAGC GCTACACCAG CCACTCCCTG
CGTCGCGGCT TCGCAACATG GGCCCACCAA AGCGGCTGGG ATCTCAAATC ATTGATGAGT
TACGTGGGCT GGAAGGATAT GAAGTCCGCT ATGCGCTATG TTGAAGCGAG CCCCTTTCAC
GGGATGGCCC GGATTACGGA TAAACCGCTG TCGCCGTAG
 
Protein sequence
MSDIDRYLQA ATRDNTRRSY RAAIEHFESA WGGFLPATAD SVARYLVAHA GVLSVNTLKL 
RLSALAQWHN SQGFADPTKS PVVRKVFKGI RALHPAQEKQ AEPLQLRDLE QTVAWLEQEM
KDAREQQDRP LLLRACRDRA LILLGFWRGF RSDELCRVQI EHVQAHAGNG ITLYLPRSKG
DRENLGQTYQ APALLKLCPV QAYIEWITEA ALVRGPVFRA VDRWGNLSEE GLHANSVIPL
LRQALERAGI SAERYTSHSL RRGFATWAHQ SGWDLKSLMS YVGWKDMKSA MRYVEASPFH
GMARITDKPL SP