Gene Pfl01_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2903 
Symbol 
ID3712667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3347076 
End bp3348374 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content62% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_348634 
Protein GI77459128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.145947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.469815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG CAACCCTCGC CACCCGCCGC TGGTGGTACA TCATGCCGAT CGTGTTCATC 
ACCTATAGCC TGGCGTACCT GGACCGCGCC AATTATGGAT TCGCTGCTGC CTCCGGAATG
GCTGAAGACC TGATGATCAC GCCGGGCCTG TCCTCGCTGC TCGGCGCGCT GTTCTTCCTC
GGTTACTTTT TCTTCCAGGT GCCCGGCGCG ATCTACGCGC AAAAGCACAG CGTCAAGAAG
CTGATCTTCG TCAGCCTGAT CCTCTGGGGC GGGCTCGCCA CACTGACCGG CGTGGTCTCC
AACGCCTATT GGCTGATTGT CATCCGCTTC ATGCTCGGCG TGGTCGAAGC GGCGGTGATG
CCGGCGATGC TGGTGTACCT GTGCCACTGG TTCACCCGCG CCGAACGCTC GCGGGCCAAC
ACCTTCCTGA TCCTCGGCAA CCCGGTGACG ATGCTGTGGA TGTCGGTGGT TTCCGGGTAT
CTGGTGCAGC ATTTCAGTTG GCGCTGGATG TTCATCATCG AAGGTCTGCC GGCAGTCCTT
TGGGCCTTTA TCTGGTGGAA GCTGGCCGAT GATCGTCCGG CCCAGGCCAA GTGGCTCAGC
GATCAGGAGA AGCACGATCT GGAAAGCGCG CTCGCCGCCG AACAGGTCGG GATCAAAGCG
GTGAAGAACT ACGCAGAAGC TTTTCGTTCG CCGAAGGTGA TCATTCTGGC GCTGCAATTC
TTCTGCTGGA GCATCGGCGT CTACGGCTTC GTGTTGTGGC TGCCGTCGAT CCTCAAGGCC
GGCGCGCAGA TGGACATGAT CGAGGCCGGC TGGCTGTCGG CGTTGCCGTA TCTGGCGGCG
GTGATCGGGA TGCTGCTGGT GTCGTGGGGC TCGGACAAGC TGCAAAAGCG TAAACGTTTC
GTCTGGCCAC CGCTGCTGAT TGCCTCAGTG GCGTTCTACG GCTCCTACGC GTTGGGCGCG
GAGCATTTCT GGTGGTCGTA CACGCTGCTG GTGATTGCCG GCGCCTGCAT GTACGCGCCT
TACGGGCCGT TCTTCGCCAT CGTCCCGGAG ATTCTGCCGG CCAACGTGGC CGGTGGCGCC
ATGGCGCTGA TCAACAGCAT GGGCGCCCTC GGTTCGTTCG GCGGCTCGTA TCTGGTCGGT
TACCTGAACA GCTCCACCGG TTCGCCCGGC GCTTCGTATC TGTTGATGAG TGGCGCGCTG
ATGCTCTCGG TGGTGCTGAC CATTTTTCTC AAGCCCGGCG CGAGCGACCG GGTGACGGCC
AAGCGCGTCG CACCGCGTCC GCTGCCGGCC CATTCCTGA
 
Protein sequence
MKTATLATRR WWYIMPIVFI TYSLAYLDRA NYGFAAASGM AEDLMITPGL SSLLGALFFL 
GYFFFQVPGA IYAQKHSVKK LIFVSLILWG GLATLTGVVS NAYWLIVIRF MLGVVEAAVM
PAMLVYLCHW FTRAERSRAN TFLILGNPVT MLWMSVVSGY LVQHFSWRWM FIIEGLPAVL
WAFIWWKLAD DRPAQAKWLS DQEKHDLESA LAAEQVGIKA VKNYAEAFRS PKVIILALQF
FCWSIGVYGF VLWLPSILKA GAQMDMIEAG WLSALPYLAA VIGMLLVSWG SDKLQKRKRF
VWPPLLIASV AFYGSYALGA EHFWWSYTLL VIAGACMYAP YGPFFAIVPE ILPANVAGGA
MALINSMGAL GSFGGSYLVG YLNSSTGSPG ASYLLMSGAL MLSVVLTIFL KPGASDRVTA
KRVAPRPLPA HS