Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2903 |
Symbol | |
ID | 3712667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3347076 |
End bp | 3348374 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_348634 |
Protein GI | 77459128 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.145947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.469815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG CAACCCTCGC CACCCGCCGC TGGTGGTACA TCATGCCGAT CGTGTTCATC ACCTATAGCC TGGCGTACCT GGACCGCGCC AATTATGGAT TCGCTGCTGC CTCCGGAATG GCTGAAGACC TGATGATCAC GCCGGGCCTG TCCTCGCTGC TCGGCGCGCT GTTCTTCCTC GGTTACTTTT TCTTCCAGGT GCCCGGCGCG ATCTACGCGC AAAAGCACAG CGTCAAGAAG CTGATCTTCG TCAGCCTGAT CCTCTGGGGC GGGCTCGCCA CACTGACCGG CGTGGTCTCC AACGCCTATT GGCTGATTGT CATCCGCTTC ATGCTCGGCG TGGTCGAAGC GGCGGTGATG CCGGCGATGC TGGTGTACCT GTGCCACTGG TTCACCCGCG CCGAACGCTC GCGGGCCAAC ACCTTCCTGA TCCTCGGCAA CCCGGTGACG ATGCTGTGGA TGTCGGTGGT TTCCGGGTAT CTGGTGCAGC ATTTCAGTTG GCGCTGGATG TTCATCATCG AAGGTCTGCC GGCAGTCCTT TGGGCCTTTA TCTGGTGGAA GCTGGCCGAT GATCGTCCGG CCCAGGCCAA GTGGCTCAGC GATCAGGAGA AGCACGATCT GGAAAGCGCG CTCGCCGCCG AACAGGTCGG GATCAAAGCG GTGAAGAACT ACGCAGAAGC TTTTCGTTCG CCGAAGGTGA TCATTCTGGC GCTGCAATTC TTCTGCTGGA GCATCGGCGT CTACGGCTTC GTGTTGTGGC TGCCGTCGAT CCTCAAGGCC GGCGCGCAGA TGGACATGAT CGAGGCCGGC TGGCTGTCGG CGTTGCCGTA TCTGGCGGCG GTGATCGGGA TGCTGCTGGT GTCGTGGGGC TCGGACAAGC TGCAAAAGCG TAAACGTTTC GTCTGGCCAC CGCTGCTGAT TGCCTCAGTG GCGTTCTACG GCTCCTACGC GTTGGGCGCG GAGCATTTCT GGTGGTCGTA CACGCTGCTG GTGATTGCCG GCGCCTGCAT GTACGCGCCT TACGGGCCGT TCTTCGCCAT CGTCCCGGAG ATTCTGCCGG CCAACGTGGC CGGTGGCGCC ATGGCGCTGA TCAACAGCAT GGGCGCCCTC GGTTCGTTCG GCGGCTCGTA TCTGGTCGGT TACCTGAACA GCTCCACCGG TTCGCCCGGC GCTTCGTATC TGTTGATGAG TGGCGCGCTG ATGCTCTCGG TGGTGCTGAC CATTTTTCTC AAGCCCGGCG CGAGCGACCG GGTGACGGCC AAGCGCGTCG CACCGCGTCC GCTGCCGGCC CATTCCTGA
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Protein sequence | MKTATLATRR WWYIMPIVFI TYSLAYLDRA NYGFAAASGM AEDLMITPGL SSLLGALFFL GYFFFQVPGA IYAQKHSVKK LIFVSLILWG GLATLTGVVS NAYWLIVIRF MLGVVEAAVM PAMLVYLCHW FTRAERSRAN TFLILGNPVT MLWMSVVSGY LVQHFSWRWM FIIEGLPAVL WAFIWWKLAD DRPAQAKWLS DQEKHDLESA LAAEQVGIKA VKNYAEAFRS PKVIILALQF FCWSIGVYGF VLWLPSILKA GAQMDMIEAG WLSALPYLAA VIGMLLVSWG SDKLQKRKRF VWPPLLIASV AFYGSYALGA EHFWWSYTLL VIAGACMYAP YGPFFAIVPE ILPANVAGGA MALINSMGAL GSFGGSYLVG YLNSSTGSPG ASYLLMSGAL MLSVVLTIFL KPGASDRVTA KRVAPRPLPA HS
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