Gene Pfl01_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2898 
Symbol 
ID3712662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3340998 
End bp3342995 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348629 
Protein GI77459123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.319126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTC GGGTTGAAAA GGCTATATTG TCCAGGAGGG TTTTACTTCA GAAAAGTTAT 
GGCGCAGCTG GAGTGTTCGC AGATCCTCCA GCCGTCGACA TTCCTGCGCA AACGCTGCCT
GGCGGCGACT TGCGTATTCC GGTGTCAGCG CTTTCCGCAC CACTTGAGTA CACGATCCCA
AAGCCAACTG AACCAGAAGA TAAAGATGAT TTGATCGAGT TCAAAATTCG CGAAAAAGGC
ACAACCCTTT GGAGCGACAT CGAACCCATG CAAGCGCTGG GGCCGATTGC CGAACGCAAG
TGGCCTTTGC CAAAAACCAT TCCGTTAACG CCATGGATGA CCGAAAAAAC GACACCGGAG
GCTCCAACAG AATACGAAGT TCAATATATC TACTGGTACG GCGCGGTCAA CCAAGGCAAT
TCGCTGATTA AGACATACGC CATTGACCGG ACGCCGCCTT ACAGAGTCAA AAACCCGGCT
TCCAATCTTT CTCCCAAGGC GGCCAATTAT CCGGCCTCCA TCCCGCCGGG CAGTGTCATC
GATGAAAAGG TTATCGCGGA TAATCCGGGC GGTATCGTGT TGACTGCTGC GGCTTACGAC
AATTATCACG CCACGGACGA ATTGTGGGCC TGGTTTGGCA AGGCTCCGGA TACGGTGCGT
GACGAGCCGG TAGTTAAAGT CACCTTGCCT GCTTCCCGTG AATTTACGAT ACCCATCAAG
ACTTACGTTG ACGCTGAAGA GGGTAGTAAC ACGGTTATCT ATAAAGTACG GGACCTTGCC
GGTAACGAGG GAAAAAACTC GAATCCCGTC TCCCGTGAAA TCAGACGGAT TGCCGATCCG
ACGAAGTTTG ATATTCCGGT CGTGCCACTG GCTGCAGACG ACCTGATTGA TCTGGCCGAC
TGCAGTGTGG GCGTTACTCT TGAGGCCGAA GTGCCTGTTC CGAATGCGCC AACAGACACC
TTGGCGGCTT TTTGGGGTAG TGAGGAGTTG GGTGAGAAAC CCGTCAGTGG CGCCGTCGGT
GGAAAGCTGA CCTGGGATGT ACCCTATGAC AAGATCAAGA AGGTATACGG CAATACCGAC
GGTGATGAAG AAACCGAGTT CAGTTATGCC ATGTTCAGAG GCAATCGATA TATTGGTGGC
AACAAGGACA CGACCCTTGT CAACATCTTC TACCGCGGCC CCGTCAATCC CGATGAGCCC
AATCCGGTCA ACCCTGTTCT TGAGAAACCT GTACTGCAGT TTGCGGGCGG TAGTACAGAC
AAGGTAGAGG AGTCGGACTA CGGGAATGAT GCGACACTTT CCGTAGAACT GTTCACGGCC
CCTCCTGCCG AAGAAGGTTG GAAAGCTACG ATCTACTATG ACAATGAGTT GGTCAAAACC
TTCGAGCTGC GGGGCGGTGA TGAGGGCACA ACGCTAGAGG CGACTTTACC CTGGAACACT
ATATTCACTC ACGGTCCAGG CACCAAACCT GTCCACTGGA TACTTCATAG TGATAACAAT
CCCAACCCGA TTTCCTGTAC TCCAAAAGAT ATTCCTGTTG CTGCGTTTCC AATCCAGACA
CCGGCACCTG AAGTGCAAAA TCTTGCTGGC CCACTGAAAA GAATCGGTTG TACAACATTG
AACTGGGGCA CCGGTGACGG GACTTCTCGC CGGAACTTGC GCGTCATCAT TCCGAAAAGT
GCCTACACCG TTTCTGGCGA GAAAATTACG TTGAGTTTCG CTGCGTATAC TGATGCCACT
CCTCCGGTAC TGGTTCCAGG GACGGACACT ACAGCACAGC TAGACGTACC TGATCCTTAT
CCAGATGCAG GCGCAACCAT TGACATTGGT GTGTATGAAA CACACTTCAA ACCAGCCAAC
CGGGCCAACG GAGTGCTGTC TTATACCATT ACTCGTACGG GCACAACACC GACTCCCGAT
TCAGCAAAAG CGCAGCATTT CATCCTGCTG ACTAACAGCG AAGGACAATA CTGTGACGAA
GTTTACCCCG CACCTTAA
 
Protein sequence
MNSRVEKAIL SRRVLLQKSY GAAGVFADPP AVDIPAQTLP GGDLRIPVSA LSAPLEYTIP 
KPTEPEDKDD LIEFKIREKG TTLWSDIEPM QALGPIAERK WPLPKTIPLT PWMTEKTTPE
APTEYEVQYI YWYGAVNQGN SLIKTYAIDR TPPYRVKNPA SNLSPKAANY PASIPPGSVI
DEKVIADNPG GIVLTAAAYD NYHATDELWA WFGKAPDTVR DEPVVKVTLP ASREFTIPIK
TYVDAEEGSN TVIYKVRDLA GNEGKNSNPV SREIRRIADP TKFDIPVVPL AADDLIDLAD
CSVGVTLEAE VPVPNAPTDT LAAFWGSEEL GEKPVSGAVG GKLTWDVPYD KIKKVYGNTD
GDEETEFSYA MFRGNRYIGG NKDTTLVNIF YRGPVNPDEP NPVNPVLEKP VLQFAGGSTD
KVEESDYGND ATLSVELFTA PPAEEGWKAT IYYDNELVKT FELRGGDEGT TLEATLPWNT
IFTHGPGTKP VHWILHSDNN PNPISCTPKD IPVAAFPIQT PAPEVQNLAG PLKRIGCTTL
NWGTGDGTSR RNLRVIIPKS AYTVSGEKIT LSFAAYTDAT PPVLVPGTDT TAQLDVPDPY
PDAGATIDIG VYETHFKPAN RANGVLSYTI TRTGTTPTPD SAKAQHFILL TNSEGQYCDE
VYPAP