Gene Pfl01_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2892 
Symbol 
ID3712656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3331953 
End bp3332654 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_348623 
Protein GI77459117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.440569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.202196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACA TTCTTCTGGT CGAAGACGAC ACCGCCCTCG CCGAACTGAT TTCCAGCTAT 
CTGGAGCGCA ACGGTTACTC CGTCAGCGTG ATCGGCCGTG GCGACCATGT GCGCGAACGG
GCGCGGCTCA ATCCGCCGGA TCTGGTGATT CTCGACCTGA TGCTGCCGGG CCTCGACGGC
TTGCAGGTTT GCAGATTGCT GCGTGCCGAT TCGGCAACGC TGCCGATCCT GATGCTCACC
GCCCGTGACG ACAGCCACGA TCAGGTACTG GGCCTGGAAA TGGGCGCCGA CGATTACGTC
ACCAAACCCT GCGAGCCACG GGTCCTGCTG GCGCGGGTAC GCACCTTGCT GCGGCGCAGC
AGCCTCGGCG AGCCGATGAC CGCCAACGAC CGGATCCTGA TGGGCAACCT GTGCATCGAC
CTGTCGGAGC GCACGGTGAC CTGGCGCGAA CAACCGGTGG AACTGTCCAG CGGCGAATAC
AACCTGCTGG TGGTGCTGGC CCGTCATGCC GGTGAAGTGC TGAGCCGCGA CCAGATCCTG
CAACGCCTGC GCGGTATCGA GTTCAACGGC ACTGACCGTT CGGTGGACGT GGCGATTTCC
AAGCTGCGAC GCAAGTTCGA CGACCACGCC GGCGAGGCGC GCAAGATCAA GACCGTGTGG
GGCAAGGGGT ATCTGTTCAG CCGTTCCGAG TGGGAATGCT GA
 
Protein sequence
MPNILLVEDD TALAELISSY LERNGYSVSV IGRGDHVRER ARLNPPDLVI LDLMLPGLDG 
LQVCRLLRAD SATLPILMLT ARDDSHDQVL GLEMGADDYV TKPCEPRVLL ARVRTLLRRS
SLGEPMTAND RILMGNLCID LSERTVTWRE QPVELSSGEY NLLVVLARHA GEVLSRDQIL
QRLRGIEFNG TDRSVDVAIS KLRRKFDDHA GEARKIKTVW GKGYLFSRSE WEC