Gene Pfl01_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2880 
Symbol 
ID3712428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3321774 
End bp3322553 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348611 
Protein GI77459105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.460718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.236104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCG AACTCAGCGT TGACCTCACC ACCCTGGCCG TTCTGGCCCT TGTCGCTTTC 
ATTGCCGGAT TCATCGACGC CATCGCCGGC GGTGGCGGTC TGTTGACCAC ACCGGCGCTG
CTCACTGCCG GCCTGCCGCC GCACCTGGTG CTGGGCACTA ATAAACTGAG TTCGACCTTC
GGCTCGGCAA CCGCCAGTTT CACCTTCTAC CGACGCAAGC TGTTCCATCC CAAGCAGTGG
ATGCACGCCA TCGTCGGCAC GCTGGTCGGT GCGCTGACCG GCGCCATCGT CGCCCATTAC
CTGCCCGCCG AATGGCTGAA CAAGATGCTG CCGGTGATCG TCTTCGCCTG TGGCCTGTAC
CTGTTGTTTG GCGGCACGCC GAAAGCGCCG TTGGACAGCG ATGCACCGAT CAAAAAGAAG
TGGCAATCGA CCCAGGGCTT CAGCCTCGGT TTCTACGACG GCGTGGCCGG CCCCGGCACT
GGCGCGTTCT GGACTGTCAG CAGTCTGCTG CTGTACCCGA TCGATCTGGT CAAGGCCAGC
GGCGTGGCGC GCAGCATGAA CTTCGTCAGC AACATTGCGG CGCTGTCGGT GTTCGTGTTT
TCCGGGCAGG TGGACTGGAT CATCGGCCTG AGCATGGGCC TGTCGGTGAT GGTCGGCGCG
TTCTTCGGGG CGCGCACCGC GATCAGCGGC GGCGCCAAGT TCATTCGTCC GGTGTTCATC
ACCGTGGTGC TGGGGTTGAC CGTGCGCCTA GCCTGGCAGC ACTGGTTCAG CGTGGCCTAA
 
Protein sequence
MPFELSVDLT TLAVLALVAF IAGFIDAIAG GGGLLTTPAL LTAGLPPHLV LGTNKLSSTF 
GSATASFTFY RRKLFHPKQW MHAIVGTLVG ALTGAIVAHY LPAEWLNKML PVIVFACGLY
LLFGGTPKAP LDSDAPIKKK WQSTQGFSLG FYDGVAGPGT GAFWTVSSLL LYPIDLVKAS
GVARSMNFVS NIAALSVFVF SGQVDWIIGL SMGLSVMVGA FFGARTAISG GAKFIRPVFI
TVVLGLTVRL AWQHWFSVA