Gene Pfl01_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2878 
Symbol 
ID3712426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3319899 
End bp3320378 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348609 
Protein GI77459103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.051006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTG CAGCCGAAGT TCGTCCGCCA TTGCCGCCGT TCAACCGTGA ATCGGCCATT 
GAAAAAGTTC GTCTGGCCGA GGATGGCTGG AACTCCCGCG ACCCGGAGCG CGTGTCGCTG
GCCTACACCC TGGACACCAA ATGGCGGAAC CGCGCCGAAT TCGCCAACAA CCGCGAAGAA
GCCAAGGGTT TCCTGACCCG CAAATGGGCC AAGGAACTGG ATTACCGCCT GATCAAGGAA
CTCTGGGCCT ACTCCGACAC CCGCATCGCC GTGCGCTACG CCTACGAATG GCACGACGAC
TCGGGCAACT GGTTCCGCTC CTACGGCAAC GAAAACTGGG AGTTCGACGA GCACGGCCTG
ATGTTCCAGC GTTACGCCTG CATCAACGAC ATGCCGATCA AGGAAAGCGA ACGCAAGTTC
CACTGGCCGC TGGGCCGGCG CCCGGATGAT CATCCGGGGT TGTCGGAACT GGGTCTGTAA
 
Protein sequence
MSTAAEVRPP LPPFNRESAI EKVRLAEDGW NSRDPERVSL AYTLDTKWRN RAEFANNREE 
AKGFLTRKWA KELDYRLIKE LWAYSDTRIA VRYAYEWHDD SGNWFRSYGN ENWEFDEHGL
MFQRYACIND MPIKESERKF HWPLGRRPDD HPGLSELGL