Gene Pfl01_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2877 
Symbol 
ID3712425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3319279 
End bp3319845 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content57% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_348608 
Protein GI77459102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.477107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TCACACGCAA CGACACAACC CGAGACATCA TTCTGGATGT CACCGAAAAG 
TTGATCTACA AAAGTGGCAT CGCGGCCACC GGCATGGATC TTCTGGTGAA AACCGCCGGC
GTTTCCAGAA AGAGTATCTA CCGCTACTTC GCCAACAAGG AGGAGCTGAC CGTCGCCGCC
CTGCAACGCC GCGACGTGCG TTGGATGCAC TGGTACAGAA GCACCGTCGA TCAGGCCGAA
ACCCCGGCCG ACCGCCTGCT CAACCTGTTT ACCGTGCTCA AGGGCTGGTT CGCCTCGGAA
GGCTTTCGGG GCTGTGCCTT CATCAATACC AGTGGCGAAA CCGGTGATCC CGAGGATCCG
GTCCGCCTGG TCGCCAAAGA CCACAAACAG AAACTGCTCG ACTACCTGTG CGAGCTGTGT
ACCGAACATG GTGCCGAGGA TCCGCAACTG CTGGCCAAAC AGCTGCTGAT CCTGATTGAC
GGCGCCATTA CCGTAGCGCT TGTGATGGGT GATCACAGTG CCGCCGATAA TGCGCAATGC
ATGGCGCGAA AGTTATTGGA CCTGTAA
 
Protein sequence
MNEITRNDTT RDIILDVTEK LIYKSGIAAT GMDLLVKTAG VSRKSIYRYF ANKEELTVAA 
LQRRDVRWMH WYRSTVDQAE TPADRLLNLF TVLKGWFASE GFRGCAFINT SGETGDPEDP
VRLVAKDHKQ KLLDYLCELC TEHGAEDPQL LAKQLLILID GAITVALVMG DHSAADNAQC
MARKLLDL