Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2877 |
Symbol | |
ID | 3712425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3319279 |
End bp | 3319845 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_348608 |
Protein GI | 77459102 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.477107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.116943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA TCACACGCAA CGACACAACC CGAGACATCA TTCTGGATGT CACCGAAAAG TTGATCTACA AAAGTGGCAT CGCGGCCACC GGCATGGATC TTCTGGTGAA AACCGCCGGC GTTTCCAGAA AGAGTATCTA CCGCTACTTC GCCAACAAGG AGGAGCTGAC CGTCGCCGCC CTGCAACGCC GCGACGTGCG TTGGATGCAC TGGTACAGAA GCACCGTCGA TCAGGCCGAA ACCCCGGCCG ACCGCCTGCT CAACCTGTTT ACCGTGCTCA AGGGCTGGTT CGCCTCGGAA GGCTTTCGGG GCTGTGCCTT CATCAATACC AGTGGCGAAA CCGGTGATCC CGAGGATCCG GTCCGCCTGG TCGCCAAAGA CCACAAACAG AAACTGCTCG ACTACCTGTG CGAGCTGTGT ACCGAACATG GTGCCGAGGA TCCGCAACTG CTGGCCAAAC AGCTGCTGAT CCTGATTGAC GGCGCCATTA CCGTAGCGCT TGTGATGGGT GATCACAGTG CCGCCGATAA TGCGCAATGC ATGGCGCGAA AGTTATTGGA CCTGTAA
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Protein sequence | MNEITRNDTT RDIILDVTEK LIYKSGIAAT GMDLLVKTAG VSRKSIYRYF ANKEELTVAA LQRRDVRWMH WYRSTVDQAE TPADRLLNLF TVLKGWFASE GFRGCAFINT SGETGDPEDP VRLVAKDHKQ KLLDYLCELC TEHGAEDPQL LAKQLLILID GAITVALVMG DHSAADNAQC MARKLLDL
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