Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2873 |
Symbol | |
ID | 3712421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3314294 |
End bp | 3315493 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348604 |
Protein GI | 77459098 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.107096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.129995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGC CTAATACTCC TCAGGCCTCG CCTCCCCGCG CCTTGCGCTG GGCGGTGGCC GGTTCGGTGG TCGTGATGAT CGCCGCCGGT GGCCTGTTCT ACTACGCCTC GAAACTGGCC GCCGCCAAAC GTCAGCACAA CCGTGACGAA GTGGTGGTCA ACATTCATCC GCACAGCTGC GAACCGAACA CCCTGACGGT GCCGGCCGGT CGCGCTAGTT TCCGCATCGT CAATCGCTCC GACCGGGCGG TGGAGTGGGA AATCCTCGAC GGCGTGCTGG TGATCGAAGA GCGCGAGAAC ATCGCGCCGG GCCTGAGCCA GGTGATCAAC GCCAACCTGC AACCCGGCGA CTACGCTATC ACCTGTGGCC TGCTGAGCAA CCCGCGCGGC ACCCTGCACG TGACGCCGAC CGCCGCCTCG GATGCCGCCG CCAAGGCCAA GCCGTCGATG GTTGCCTTCG TCGGGCCGCT GTCGGAGTTT CGCGTCTACC TGGCCAGCCA GGGCAGCGCG CTGATCAAGG CCGTGACGGC GCTGAATCAA GCCATCGACA GCGGCGATCT GGCCCAGGCC CAGGCGTTGT ATTTGCCGGC CCGCGCGGCG TATCAGCGTC TGGCCCCCGC CGCACAACGC CTGGCGGAAC TGGACAACAG CATCAACGCC CGCGCCGATT ACTTCGAAAA ACGCGAGCAG GATCCGGCCT TCGTCGGTTT CCACCGTCTC GAATACGCGC TGTTCCAGCA ACGCAAACTC GACGGGCTGA CACCGATTGC CCAAGGCTTG CTCGACAACG TCACCACGCT GAAACAACAG CTGCTTGTTC AGTCGCTGCC GCCGGAGCAA CTGGTGGAAA TCGTCGTGCG CAACCTCAAC ACCCTCGCCG ACGTGCGCGC CGCCAGCGGC GAAGAGGAAC GCTACAGTCA CAGTGATCTC AACGGCTTCG CGGCCAATCA GGAAACCGCG CGCAAAGTCG TCGAACTGCT GCGCCCGCTG CTGAGCAAAT CCGCCGCCGA CCTGCTGCCG AGAATCGACG GCGCGCTGGC TGATTTCGAT ACCACGCTGG ACGGTTTCAG GGTCAAGGAC GGCTACGCCA GTTACGACAC CGTCAACGGT GAACAACGCA AGCAGATCGC CGACAAGGCC AAGGCCCTGG CCGACGCCCT CGACGCCATT GATCCCGCCC TCGGCCTCTC CGGCCTGTAA
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Protein sequence | MSKPNTPQAS PPRALRWAVA GSVVVMIAAG GLFYYASKLA AAKRQHNRDE VVVNIHPHSC EPNTLTVPAG RASFRIVNRS DRAVEWEILD GVLVIEEREN IAPGLSQVIN ANLQPGDYAI TCGLLSNPRG TLHVTPTAAS DAAAKAKPSM VAFVGPLSEF RVYLASQGSA LIKAVTALNQ AIDSGDLAQA QALYLPARAA YQRLAPAAQR LAELDNSINA RADYFEKREQ DPAFVGFHRL EYALFQQRKL DGLTPIAQGL LDNVTTLKQQ LLVQSLPPEQ LVEIVVRNLN TLADVRAASG EEERYSHSDL NGFAANQETA RKVVELLRPL LSKSAADLLP RIDGALADFD TTLDGFRVKD GYASYDTVNG EQRKQIADKA KALADALDAI DPALGLSGL
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