Gene Pfl01_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2873 
Symbol 
ID3712421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3314294 
End bp3315493 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348604 
Protein GI77459098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.107096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.129995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC CTAATACTCC TCAGGCCTCG CCTCCCCGCG CCTTGCGCTG GGCGGTGGCC 
GGTTCGGTGG TCGTGATGAT CGCCGCCGGT GGCCTGTTCT ACTACGCCTC GAAACTGGCC
GCCGCCAAAC GTCAGCACAA CCGTGACGAA GTGGTGGTCA ACATTCATCC GCACAGCTGC
GAACCGAACA CCCTGACGGT GCCGGCCGGT CGCGCTAGTT TCCGCATCGT CAATCGCTCC
GACCGGGCGG TGGAGTGGGA AATCCTCGAC GGCGTGCTGG TGATCGAAGA GCGCGAGAAC
ATCGCGCCGG GCCTGAGCCA GGTGATCAAC GCCAACCTGC AACCCGGCGA CTACGCTATC
ACCTGTGGCC TGCTGAGCAA CCCGCGCGGC ACCCTGCACG TGACGCCGAC CGCCGCCTCG
GATGCCGCCG CCAAGGCCAA GCCGTCGATG GTTGCCTTCG TCGGGCCGCT GTCGGAGTTT
CGCGTCTACC TGGCCAGCCA GGGCAGCGCG CTGATCAAGG CCGTGACGGC GCTGAATCAA
GCCATCGACA GCGGCGATCT GGCCCAGGCC CAGGCGTTGT ATTTGCCGGC CCGCGCGGCG
TATCAGCGTC TGGCCCCCGC CGCACAACGC CTGGCGGAAC TGGACAACAG CATCAACGCC
CGCGCCGATT ACTTCGAAAA ACGCGAGCAG GATCCGGCCT TCGTCGGTTT CCACCGTCTC
GAATACGCGC TGTTCCAGCA ACGCAAACTC GACGGGCTGA CACCGATTGC CCAAGGCTTG
CTCGACAACG TCACCACGCT GAAACAACAG CTGCTTGTTC AGTCGCTGCC GCCGGAGCAA
CTGGTGGAAA TCGTCGTGCG CAACCTCAAC ACCCTCGCCG ACGTGCGCGC CGCCAGCGGC
GAAGAGGAAC GCTACAGTCA CAGTGATCTC AACGGCTTCG CGGCCAATCA GGAAACCGCG
CGCAAAGTCG TCGAACTGCT GCGCCCGCTG CTGAGCAAAT CCGCCGCCGA CCTGCTGCCG
AGAATCGACG GCGCGCTGGC TGATTTCGAT ACCACGCTGG ACGGTTTCAG GGTCAAGGAC
GGCTACGCCA GTTACGACAC CGTCAACGGT GAACAACGCA AGCAGATCGC CGACAAGGCC
AAGGCCCTGG CCGACGCCCT CGACGCCATT GATCCCGCCC TCGGCCTCTC CGGCCTGTAA
 
Protein sequence
MSKPNTPQAS PPRALRWAVA GSVVVMIAAG GLFYYASKLA AAKRQHNRDE VVVNIHPHSC 
EPNTLTVPAG RASFRIVNRS DRAVEWEILD GVLVIEEREN IAPGLSQVIN ANLQPGDYAI
TCGLLSNPRG TLHVTPTAAS DAAAKAKPSM VAFVGPLSEF RVYLASQGSA LIKAVTALNQ
AIDSGDLAQA QALYLPARAA YQRLAPAAQR LAELDNSINA RADYFEKREQ DPAFVGFHRL
EYALFQQRKL DGLTPIAQGL LDNVTTLKQQ LLVQSLPPEQ LVEIVVRNLN TLADVRAASG
EEERYSHSDL NGFAANQETA RKVVELLRPL LSKSAADLLP RIDGALADFD TTLDGFRVKD
GYASYDTVNG EQRKQIADKA KALADALDAI DPALGLSGL