Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2869 |
Symbol | |
ID | 3712417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3309501 |
End bp | 3310262 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_348600 |
Protein GI | 77459094 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.107455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCG AGAACAAGGT TTTTATCGTC ACCGGCGGTG CGTCCGGGCT GGGTGCAGCC ACCGCTGAGC TGTTGGTTGC CGCCGGCGCC AAAGTGATGC TGGTGGACAT GAACGCCGAA GCCGTCGCCG CTCAGGCCCA GCGCCTCGGC GCGCAAAGCG TGGTGGCCGA CATCAGCAAC GAAGCCGCCG CCGAAGCCGC CGTGCAGGCG ACCGTTAAAG CCTTCGGCAG CCTCAACGGG CTGGTGAACT GCGCCGGCAT CGTTCGCGGC GAGAAGATTC TTGGCAAGAA CGGCCCGCAC GCCTTGTCCA GCTTCGCCCA GGTGATCAAC GTCAACCTGA TCGGCAGTTT CAACATGCTG CGTCTGGCAG CCGCTGCGAT TGCCGAAAGC GAAGCCAACG CCGACGGCGA GCGTGGTGTG ATCATCAACA CCGCGTCGGT TGCGGCGTTC GACGGCCAGA TCGGCCAGGC CGCGTATTCG GCGTCCAAAG GCGCGATCGC CAGCCTGACT CTGCCTGCCG CTCGTGAACT GGCGCGCTTC GGCATCCGCG TGATGACCAT CGCCCCGGGC ATTTTCGAAA CCCCGATGAT GGCCGGCATG ACCCCGGAAG TGCGCGACTC GCTGGCCGCC GGCGTACCGT TCCCGCCGCG TCTGGGCAAA CCTGCCGAGT ACGCCGCGCT GGTGCGGCAT ATCATTGAAA ACAGCATGCT CAACGGCGAG GTGATCCGTC TCGACGGTGC CTTGCGCATG GCTGCCAAGT AA
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Protein sequence | MQIENKVFIV TGGASGLGAA TAELLVAAGA KVMLVDMNAE AVAAQAQRLG AQSVVADISN EAAAEAAVQA TVKAFGSLNG LVNCAGIVRG EKILGKNGPH ALSSFAQVIN VNLIGSFNML RLAAAAIAES EANADGERGV IINTASVAAF DGQIGQAAYS ASKGAIASLT LPAARELARF GIRVMTIAPG IFETPMMAGM TPEVRDSLAA GVPFPPRLGK PAEYAALVRH IIENSMLNGE VIRLDGALRM AAK
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