Gene Pfl01_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2860 
Symbol 
ID3712180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3298598 
End bp3299293 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID 
ProductHPP 
Protein accessionYP_348591 
Protein GI77459085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.784631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTC GCTGGTTGCC CGCCGCCATC AACACCCGCC CCACCGAATG GAGCCGCGCC 
GCCATCGGCA TGGCCCTGGG CACGTTGTTC AGCGTATGGG CGTGCAGTCA GGTATTCGGC
ATTGAAGTGG CTTACCACTT GATCGGCCCG CTGGGCGCCT CGGCGGTGTT GCTGTTCGCT
GTGTCCTCCG GCGCCCTCGC CCAGCCGTGG TCGATCATCG GCGGCTACCT GTGTGCAGGC
GTGGTCGCGT TGCTGGTGGC CCACGTCCTC GGCCGAACCC TCGGCAGCGC GTGCCTCGCG
GCAGGCATGG CGCTGATCCT GATGTGCTGG CTGCGCTGCC TGCACCCGCC GGCCGGCGCC
GTCGCGTTGA CCATGGTGCT GGCCGACCCG ATGACCATCG CCATGGACTG GAAAGCCCTG
GAACCGGTGA TGCTCAGCGC CGCCTGCCTG CTGCTGGCCG CACTGGCCTA CAACAACCTC
ACCCACATCC GCTACCCGAA ACGCCCTGCG GAGCCCGCGC CGGCTGTGGC ACCGGTCGAC
ATTCAGGCCA TCACGGCCGA GGACCTGAAA CTGGCACTGG CGGACATGGA GGCCTTCATC
GATGTCACGC CGGAAGATCT GGAGCAGTTG ATTCATGCCA GTGAACGGCA CGCCAGGCGG
CGCAGTATTG GTGAAGTGCT GGCTGGTCGC AGGTAA
 
Protein sequence
MLARWLPAAI NTRPTEWSRA AIGMALGTLF SVWACSQVFG IEVAYHLIGP LGASAVLLFA 
VSSGALAQPW SIIGGYLCAG VVALLVAHVL GRTLGSACLA AGMALILMCW LRCLHPPAGA
VALTMVLADP MTIAMDWKAL EPVMLSAACL LLAALAYNNL THIRYPKRPA EPAPAVAPVD
IQAITAEDLK LALADMEAFI DVTPEDLEQL IHASERHARR RSIGEVLAGR R