Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2856 |
Symbol | |
ID | 3712176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3294168 |
End bp | 3295013 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_348587 |
Protein GI | 77459081 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.709645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTCCT TGCAACCCAC CTGGCCCGAC CAGCACAAAG CCTGCCTCGC CCTGGCCTTC GACCTCGACG GCCCGACCGG TGACGCCATG CTCAACAACT CGATCTGGCA CAAACCCGAA TACTTCGGCT TCGGCGGCTA CGGCCCCTAC CGCGCCCTGC CCCGCCTGCT CGACCTGCTC GACGCCTTCA AGATCCCGAC CACCTTCTTC GTTCCCGCCT GGGTCGTGGA AAACTGGCCG AAACAGTGCC AGGCCATCGT CGAGCGCGGT CATGAAGTCG CCTACCACGG CTACAAACAC GAATCCTTCT ACGCCCTGAC GCTGGACCAG CAGCAGGCCG TGATGAACAA ATCCCGCGAC GTGTTCTGGC AATACCTGCA CATCCGCGCC GAGGGCTTTC GCACCCCTTC CGGCGACTGG CGCGCCGAAA CCCCGGCGAT GCTGGCCGAC AACGGCGTCA TCTATTCCAG CAGCATGCGC GGCGATGATC GCCCATACCT GGTCAACGTC CCCGGCCACG ACACCCCGCT GGTGGAAATC CCCGGCCGCT GGGAAATGGA TGACTACGCC TCCCTCGCCT ACACCCGCGC ACCGAACTTC CCGTCCGGCC TCGACCGCAC CGCCAGCTAC GAGCTGACCC TCGACAACTG GCAGCGCGAG TACGACGGGG CGATGGACGA AGGTCTGTGC CTGACCACCC TGTTCCACCC GAAAATCACC GGCAAACCGG GGCGCATCCT GTTGCTGGAG AAACTCTTCG AACACATGCG CCAGCGCGAT GACGTGTGGT TCGCCACCTG CCGCGACGTC GCCCGTTGGT GGCTGAAGGA GCATCACCAT GGCTGA
|
Protein sequence | MSSLQPTWPD QHKACLALAF DLDGPTGDAM LNNSIWHKPE YFGFGGYGPY RALPRLLDLL DAFKIPTTFF VPAWVVENWP KQCQAIVERG HEVAYHGYKH ESFYALTLDQ QQAVMNKSRD VFWQYLHIRA EGFRTPSGDW RAETPAMLAD NGVIYSSSMR GDDRPYLVNV PGHDTPLVEI PGRWEMDDYA SLAYTRAPNF PSGLDRTASY ELTLDNWQRE YDGAMDEGLC LTTLFHPKIT GKPGRILLLE KLFEHMRQRD DVWFATCRDV ARWWLKEHHH G
|
| |