| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2855 |
|---|
| Symbol | |
|---|
| ID | 3712175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3293283 |
|---|
| End bp | 3294107 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_348586 |
|---|
| Protein GI | 77459080 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.671238 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TCGTCATTCC AGCAGTACTC ACCTCCCTGA TGTCTTGCGG TGTCGCCGTG
GCCGCCGAAT TGCCGGCCAG CATCAAGGAA AAAGGCGAGA TCGTCGTCGC GATCATGCCC
AACTATCCGC CGATGGACTT CAAGGACCCG GCCACCAACA AGCTCACCGG CCTTGACTAC
GACCTGGGCA ACGCCCTGGC CGAACGCCTC GGGGTGAAGA TCAAGTGGCA GGAAACCGGC
TTCGAGCAAA TGATCAACGC CCTGACCACC GAGCGCGTGG ACATGGTTCT GTCGGGCATG
ACCGACACCG CCGAGCGCCA GGCCAGCGTG ACCTTCGTCG ACTACTTCAC CAGCGGCCCG
CAGTTCTACA CCTTGCAGAA GAACGCAACG ACCAATGAAA TCATCGACCT GTGCGGCAAG
AAAGTCGGCA CCAGCCGCCG CACCACCTTC CCGGCGGAAA TCGCTGCGTG GAGCAAGGAA
AACTGTGAAG CGGCCGGCAA ACCTGCAATC AACGTGATCG GCACCGAAGG CTCGGCCGAC
GCCCGTGCGC AACTGCGCCA GAGCCGCATC GATGCGGCGA TGCAGGGCAG CGAAACCCTG
TCGTACCTCA AGACTCAGGA AAAGGACATG TACAAGACGG TCGGCCAGCC GATCTCCGTG
CAGTTCACCG GGTTGGGTGT GAGCAAGAAG AAGCCGGAGC TGAGTGAAGC GGTGAAGGTG
GCGTTGCAGA GCATGGTGGA TGACGGCAGC TATAACGCGA TTCTGAAGAA ATGGGATCTG
GAGCTGGGTG CGATCAAGGA TGTGACCATT AACGCGGGCA AGTAA
|
|---|
| Protein sequence | MKNFVIPAVL TSLMSCGVAV AAELPASIKE KGEIVVAIMP NYPPMDFKDP ATNKLTGLDY
DLGNALAERL GVKIKWQETG FEQMINALTT ERVDMVLSGM TDTAERQASV TFVDYFTSGP
QFYTLQKNAT TNEIIDLCGK KVGTSRRTTF PAEIAAWSKE NCEAAGKPAI NVIGTEGSAD
ARAQLRQSRI DAAMQGSETL SYLKTQEKDM YKTVGQPISV QFTGLGVSKK KPELSEAVKV
ALQSMVDDGS YNAILKKWDL ELGAIKDVTI NAGK
|
|---|
| |