| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2837 |
|---|
| Symbol | |
|---|
| ID | 3712601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3272894 |
|---|
| End bp | 3273907 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_348568 |
|---|
| Protein GI | 77459062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.383478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCAT CCCTTCCGTC CTTTCTGAAA CAGGCCGCGC TGGCGACTGC GCTGCTCGCG
GCCGGTCAGG TGTTTGCCGC CGACTCCGTC GGCCTTGTGG TCTACAACGC CCAGCACGAA
ACCCTGACCA AGGCCTGGGT CGCCGGCTTC ACCGAGGAAA CCGGGATCCC GGTCACCGTG
CGCAACGGCG ACGACACGGA AATGGGCAAT CAGATCGTGC AGGAAGGTGC GGCGTCGCCG
GCGGATGTGT TCCTGACGGA AAACTCCCCG GCCATGGTCC TGGTGGACAA CGCCAAGCTG
TTCGCGCCGG TGGCTCCGGC AACCCTTGAG CAAGTCGATG CGGCTTATCG ACCGGCCCAC
GGTCAGTGGG TCGGCATCGC CGCGCGCTCG ACGGTGTTCG TCTATAACCC GGCCAAACTG
CCGGAAAAGG ACCTGCCCAA ATCCCTGATG GACCTCGCGA CCCCGGCCTG GAAAGGTCGC
TGGGCCGCGT CGCCTGCCGG TGCGGATTTC CAGGCCATCG TCGCCGCCGT GCTGGAACAG
AAAGGCGAAG CCGCCACCCT CGAATGGCTC AAGGGCATGA AAGCCAATTT CACCGCCTAC
CGGGGCAACA GTTCGGTGCT CAAAGCGGTG AATGCCGGGC AAGTCGACAG CGGCGTGATC
TATCACTATT ACGCGTTCGT CGATCAGGCC AAGACCGGCG AAAACAGCAA GAACACTGCC
CTGCACTACT TCAAGCATCA GGATCCGGGG GCGTTCGTGA GCATTTCCGG TGGTGGCGTG
CTGGCTTCCA GCAAACACCA GGAGGACGCG CAGAAATTCC TCCAGTACAT CACCGGCAAA
CAAGGCCAGG AAGTCCTGCG CACCGGCAAT TCCTTTGAAT ACGCCGTGGG CAAGGACTCG
GCCTCCAACC CCAAACTGGT GCCGTTGAAG GATCTGGACG CGCCGAAAGT CGATGCATCG
AAGCTCGACA GCAAGAAAGC CGTCGAACTG ATGACCCAGG CAGGACTGCT GTAA
|
|---|
| Protein sequence | MSPSLPSFLK QAALATALLA AGQVFAADSV GLVVYNAQHE TLTKAWVAGF TEETGIPVTV
RNGDDTEMGN QIVQEGAASP ADVFLTENSP AMVLVDNAKL FAPVAPATLE QVDAAYRPAH
GQWVGIAARS TVFVYNPAKL PEKDLPKSLM DLATPAWKGR WAASPAGADF QAIVAAVLEQ
KGEAATLEWL KGMKANFTAY RGNSSVLKAV NAGQVDSGVI YHYYAFVDQA KTGENSKNTA
LHYFKHQDPG AFVSISGGGV LASSKHQEDA QKFLQYITGK QGQEVLRTGN SFEYAVGKDS
ASNPKLVPLK DLDAPKVDAS KLDSKKAVEL MTQAGLL
|
|---|
| |