Gene Pfl01_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2823 
Symbol 
ID3712220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3254451 
End bp3255869 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content63% 
IMG OID 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_348554 
Protein GI77459048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACC ACCGCCTGAT GACATTGACC TGGATCTTCA CCGAGAAATT CGGCCTGATC 
CTGCTGTCGA TGATTACCTT CGTCGCCTAC GCCAGGTTGC TGTCGCCAGC CGAGCTGGGT
GTGGGCACGG TGATCATTGC CATCGTCGAA CTGATCGGTC TGGTGTACTC GTCGGTGCTC
GAAGACCCGC TGGTACGGCT TGAGCGGCTG GAAGACAAGC ACATCAGCAC AGCCTACTGG
GCGGCGGTGC TCGTCAGCCT GGCGAGCATC GGCGTCATTT CGGGCGCGGT CATGCTCTAC
ACCCCCGACC CGCTGCTGCA ATGGATGACG GCGATAGCCT CGATAAAGAT CCTGTTCACC
ATGATGGCGC GGGTCTATGT GGCGCAGATG CGCCGCAGCA GCAACTTCAG GATGCTGGCG
TCGCGCACGC TGCTGGGCAA AGTGGCGGGC GGCGTCGGCG GGATTGCCGT TGCGCTTTGG
GGGCTGGGTG CGTGGGCGGT CATTGCCCAG GCGCTGATCA TGGAACTGGT GTCGATCATT
GTGTTGATGC GCGCGGACCC GCGGCGCATC CCCTTTCACA TCGACGGCCC GACCCTGCGC
GAGTTGTTGA GGTCAGGCGC ACCGGTTGCC GTCAACGCGC TGAGCTCGCA AACCCTGCAG
CGCGGGGTCA ATGTGGTTCT GGGCATCACC GCCGGCGCGA ACGCGGTCGG CATGTTCAAC
ATGGCGATGC GCATCATCGA ACTGCCACGC ACTGCAATCT ACAACGGCCT GCTGAGCTAC
GCGCTGCCGG CGTTTTCCCG GCGCAGCGCA GAGCCCAAAC GATTGATCGG GATCGTTGGC
GATTCAACCG CCGTCAGCGG TTTTCTGTTA ACGCCCCTGT TCGTCGGACT CGCACTCACG
GCAAGCGACC TGATCCTGTT GATCTTCGGC GCCAAATGGG CAGAGGCCAT CCCGCTGCTG
CAAGTGCTGG CCTGCACCGC CGCCATCGGC AACAGCGCCA TGTACGCCAC CACCGCACTG
GTGGCGGTCA ACCGCAGCCA CCTCACGATC AAGGCCGAAG TGCTGACCAC CGCTCTGGCC
CTGGCGCTGG TCTACGCCCT GGGCAACCTG TATGGCGGCA TGGCCGCAGC CGTCGCTCTG
CTGGCGCGCA TGCTGGTCAT CACGCCGTTG CAAATCCGCG GCCTGAACAC GGCGATCGGC
TACAGCTGGC GCGGCTTTTT CGAAGCCAGT TACCGCAGCA TGATCGCTTC CCTGGTCATG
GCTGCAACCG TGCTGCTGGT GCTACCGCAG CTGGGTCTCC AGGGTTACCT GCATTTGATC
GGCAGCGTCG TGCTCGGCGC ACTGAGTTAT GCCGTGGGTT ACAGCGCCCT GCACCCGCAC
TGGCCACAGG AATTCAAATC GGTTTTCACC TCCCGCTGA
 
Protein sequence
MANHRLMTLT WIFTEKFGLI LLSMITFVAY ARLLSPAELG VGTVIIAIVE LIGLVYSSVL 
EDPLVRLERL EDKHISTAYW AAVLVSLASI GVISGAVMLY TPDPLLQWMT AIASIKILFT
MMARVYVAQM RRSSNFRMLA SRTLLGKVAG GVGGIAVALW GLGAWAVIAQ ALIMELVSII
VLMRADPRRI PFHIDGPTLR ELLRSGAPVA VNALSSQTLQ RGVNVVLGIT AGANAVGMFN
MAMRIIELPR TAIYNGLLSY ALPAFSRRSA EPKRLIGIVG DSTAVSGFLL TPLFVGLALT
ASDLILLIFG AKWAEAIPLL QVLACTAAIG NSAMYATTAL VAVNRSHLTI KAEVLTTALA
LALVYALGNL YGGMAAAVAL LARMLVITPL QIRGLNTAIG YSWRGFFEAS YRSMIASLVM
AATVLLVLPQ LGLQGYLHLI GSVVLGALSY AVGYSALHPH WPQEFKSVFT SR