Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2816 |
Symbol | |
ID | 3712213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3246446 |
End bp | 3247837 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | sugar transferase |
Protein accession | YP_348547 |
Protein GI | 77459041 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCGC TCTATACCGC TCACATGACA CACCGCCGAG GCCTGACATT CTGGGGCCAG TGGTTGTGCG CGCTGTCGCT GGTCACCGCG CTGTTGATAT TGCTCGTGCA CTGGCGCGTC GGCAGTCTGA CCAGCGAATA CCGCATCCTG ATCATTCTGA CGGTGCTCGG CTCGATACCG ATCTACAGCG TGATGCAGGT CTACCACAAA CGCCATGGCT TGCTGGTCGG GCTTGGCAGG TTGCTGGCCG GGTGGTTGAC CCTGCTGGCC GTACTGGCGG CGATTGCGTT CTTCACCCAG ACCAGCGCCA TTTATTCACG CCAGGTGATC ATGGTCTGGG CGGTGCTGGG TTTCGTGGTG CAGGCCTTGA GCTTTCTGCC CCTGCATTAC CTGGCCCGCC TGTACTCGCG CAAGGTCTGC AACGGACGTC GTTCGGTGAT CATCGGTACC TGCCCGACGG CCCATGAACT GGCGAAAAAA CTGTCCCGAC CGAACCGCGC GCTGGTGCTG GGTTTCATTG CCGCCGAGGA CAGCTGCGGC CCTGCCCCCA GCATTCTGCC GTTGCTCGGC CACGTTTCCG CTATCCGCGA GATCATCACG GGCCTGGAAG TGCGTCGCGT CTATATCGTG CTGCCGATGG CCCATGCAGC AACCATCGAA GCGCTTTATA TCGACCTGCT GGACATGAAT GTCGACGTGG TGTGGATCCC GGATTTTGGC AGCATGGTGT TGCTCAACCA TTCGATCTCG GAAATCGAGC GAATGCCGGC CATCTACCTC AACGAGAGCC TGATCAGTTC GCACCCCGCC AGCCTGTTTT GCAAGGATCT GTTTGAGCGA AGCCTCGCCG CCCTGGCCAT TTTTCTGCTC AGCCCCGTGC TGCTGGTGGT CGCCGTTGCC GTCAAGCTGA CCTCTGCAGG GCCAGTGCTG TTCAAGCAGA ACCGTCACGG TTGCAACGGC GAAGTGATCA AGGTCTGGAA GTTTCGCTCG ATGCACGTCC ACGACGACCA GGAGGTACGC CAGGCCACCC GCAACGATGA CCGCCTCACG CCGATCGGCG GTTTCCTGCG CCGCAGTTCG ATCGACGAAT TGCCACAGCT GTTCAATGTC CTGTCCGGCC GGATGGCCCT GGTCGGCCCG CGTCCGCATG CCGTCACCCA CAACCTTTAT TACACCGGCA AGGTGCGCGC CTACATGGCC CGGCATCGCC TCAAGCCGGG TATCACCGGG CTGGCCCAGA TCACTGGCCA TCGTGGCGAA ACCGAGACCG TGGAAAAGAT GCAGCTGCGC GTCGCCCAGG ACCTCAACTA CATCAACCAG TGGTCGCTGT GGCTCGACAT CAAAATCCTC ATCAAGACGC CCTTCACCCT GTTCTCGAAA AACATCTACT GA
|
Protein sequence | MTSLYTAHMT HRRGLTFWGQ WLCALSLVTA LLILLVHWRV GSLTSEYRIL IILTVLGSIP IYSVMQVYHK RHGLLVGLGR LLAGWLTLLA VLAAIAFFTQ TSAIYSRQVI MVWAVLGFVV QALSFLPLHY LARLYSRKVC NGRRSVIIGT CPTAHELAKK LSRPNRALVL GFIAAEDSCG PAPSILPLLG HVSAIREIIT GLEVRRVYIV LPMAHAATIE ALYIDLLDMN VDVVWIPDFG SMVLLNHSIS EIERMPAIYL NESLISSHPA SLFCKDLFER SLAALAIFLL SPVLLVVAVA VKLTSAGPVL FKQNRHGCNG EVIKVWKFRS MHVHDDQEVR QATRNDDRLT PIGGFLRRSS IDELPQLFNV LSGRMALVGP RPHAVTHNLY YTGKVRAYMA RHRLKPGITG LAQITGHRGE TETVEKMQLR VAQDLNYINQ WSLWLDIKIL IKTPFTLFSK NIY
|
| |