Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2801 |
Symbol | |
ID | 3714542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3227695 |
End bp | 3228540 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_348532 |
Protein GI | 77459026 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCA TTAACCCGCA TCCGGCCAAA GCGGCTGTTA CCCCGCAAAA GCAGCCGCCA CTGACACGTC AGCTGTTCGG CTTTCGCACG CGCCTGTATC TGACGTGGGC GGCGCTGTCG GGTCTGGGCG TGTGGTTTTT CATGCGCTTC GATCTGAAGT TTTCGATCAT TCTGGAGAAG TGGCCCAACC TGGTCGGCCT GCATCTGGGC CCGAACGGGT TCTTGCAGGG CGCTGCGCTG ACGATATTCC TGTGTTTCTG CTCGATCTGG TTTTCGTTAT TGCTGGGCTT TGTCACCGCG CTGGCCAGGC TGTCGAGCAG CGCCGTGGCA TTTGGTATCG CCAGCTTCTA CGCCTCGTTC TTTCGCGGCA CGCCACTGTT GATCCAGATC CTGTTGATCT ATCTGGGGCT GCCGCAGTTG GGCGTGGTGC CGGGTGCAAT CAGCGCCGGG ATCATCGCGC TGTCGCTCAA CTACGGGGCT TATCTGAGTG AGATTTTTCG TGCCGGCATT CTCGCGGTTG CCCCTGGTCA GCGCGAAGCA GCAGCCGCAC TGGGCCTGAG ACCGGCCGCG ACGTTCATCC ATATCATCCT GCCGCAAGCC ATGCGCACGA TCATTCCGCC GACCACCAGC CAGTTCATCT CGATGCTCAA GGATTCTTCC CTGATTTCGG TCATGGGGGT CTGGGAAGTG ATGTTTCTGG CGCAGTCGTA CGGGCGTTCG TCCTACCGTT ACATTGAAAT GCTGACCACC GCAGCCGCCA TCTATTGGCT GTTATCCATC GGTCTCGAAC TGATCCAGCA TCGCCTCGAA CGCCATTACG GCAGAGGCTT CAAGCATCAG CGCTGA
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Protein sequence | MTAINPHPAK AAVTPQKQPP LTRQLFGFRT RLYLTWAALS GLGVWFFMRF DLKFSIILEK WPNLVGLHLG PNGFLQGAAL TIFLCFCSIW FSLLLGFVTA LARLSSSAVA FGIASFYASF FRGTPLLIQI LLIYLGLPQL GVVPGAISAG IIALSLNYGA YLSEIFRAGI LAVAPGQREA AAALGLRPAA TFIHIILPQA MRTIIPPTTS QFISMLKDSS LISVMGVWEV MFLAQSYGRS SYRYIEMLTT AAAIYWLLSI GLELIQHRLE RHYGRGFKHQ R
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