Gene Pfl01_2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2801 
Symbol 
ID3714542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3227695 
End bp3228540 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content59% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_348532 
Protein GI77459026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCA TTAACCCGCA TCCGGCCAAA GCGGCTGTTA CCCCGCAAAA GCAGCCGCCA 
CTGACACGTC AGCTGTTCGG CTTTCGCACG CGCCTGTATC TGACGTGGGC GGCGCTGTCG
GGTCTGGGCG TGTGGTTTTT CATGCGCTTC GATCTGAAGT TTTCGATCAT TCTGGAGAAG
TGGCCCAACC TGGTCGGCCT GCATCTGGGC CCGAACGGGT TCTTGCAGGG CGCTGCGCTG
ACGATATTCC TGTGTTTCTG CTCGATCTGG TTTTCGTTAT TGCTGGGCTT TGTCACCGCG
CTGGCCAGGC TGTCGAGCAG CGCCGTGGCA TTTGGTATCG CCAGCTTCTA CGCCTCGTTC
TTTCGCGGCA CGCCACTGTT GATCCAGATC CTGTTGATCT ATCTGGGGCT GCCGCAGTTG
GGCGTGGTGC CGGGTGCAAT CAGCGCCGGG ATCATCGCGC TGTCGCTCAA CTACGGGGCT
TATCTGAGTG AGATTTTTCG TGCCGGCATT CTCGCGGTTG CCCCTGGTCA GCGCGAAGCA
GCAGCCGCAC TGGGCCTGAG ACCGGCCGCG ACGTTCATCC ATATCATCCT GCCGCAAGCC
ATGCGCACGA TCATTCCGCC GACCACCAGC CAGTTCATCT CGATGCTCAA GGATTCTTCC
CTGATTTCGG TCATGGGGGT CTGGGAAGTG ATGTTTCTGG CGCAGTCGTA CGGGCGTTCG
TCCTACCGTT ACATTGAAAT GCTGACCACC GCAGCCGCCA TCTATTGGCT GTTATCCATC
GGTCTCGAAC TGATCCAGCA TCGCCTCGAA CGCCATTACG GCAGAGGCTT CAAGCATCAG
CGCTGA
 
Protein sequence
MTAINPHPAK AAVTPQKQPP LTRQLFGFRT RLYLTWAALS GLGVWFFMRF DLKFSIILEK 
WPNLVGLHLG PNGFLQGAAL TIFLCFCSIW FSLLLGFVTA LARLSSSAVA FGIASFYASF
FRGTPLLIQI LLIYLGLPQL GVVPGAISAG IIALSLNYGA YLSEIFRAGI LAVAPGQREA
AAALGLRPAA TFIHIILPQA MRTIIPPTTS QFISMLKDSS LISVMGVWEV MFLAQSYGRS
SYRYIEMLTT AAAIYWLLSI GLELIQHRLE RHYGRGFKHQ R