Gene Pfl01_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2800 
Symbol 
ID3714541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3226286 
End bp3227659 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348531 
Protein GI77459025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CTAAACCTCT GCTGTTTGCA CTTTATGAAC AAGCCAGCGT CGGGTGCGGC 
GGTGCGCCGA GTCTGTGGAC GCACCCGGCT GACGAACGCC TGGCGATCAA TTCGCTGGGC
TACTGGTCAA ACCTGGCGCG GATTGCCGAT CAGGCGCACC TCGATATGTT GTTCTTTGGT
GATGTGCTGG GCTTCTACGA TGTGCTGGGT GGCAACGCCG ATGCGGCAGT GAAATGGGCG
GTGGAGGCAC CGGCCAACGA TCCGTTGATG ATCATTCCGG CGTTGGCGGC CGTGACGGAA
AACCTGGCGT TTGGTGTCAC GGTGACCACC AGTTATGAGC ACCCGTTTAC CCACGCCCGG
CGCTTCAGCA CGCTTGATCA CCTCACCAAT GGGCGAGTGG GGTGGAATAT CGTCACCTCT
TACCTTTCCA GCGCCGCCCG CAATTTCGGG CTGGAGCAAA TGATCAAGCA TGACGATCGC
TATGAGCGTG CCGAGGAGTT TCTCGATGTG GTGTACAAAC TCTGGGAAGG CAGTTGGGCC
GACGACGCCG TGGTGGCCGA CAAGTCCCGC CAGCTGTATG CCAGAGGCGA GCGGGTGCGA
CCGATCAATC ACGAGGGTGC GCACTATCGC GTGGCCGGGC CGCACCTGAC CGCTCCGTCC
CCGCAGCGCA CCCCGTTGCT GATTCAGGCG GGCTGGTCGG GACGCGGTCG AGAGTTCGCC
GCCAAGCATG CGGAACTGAT CTTCATCGCC AAATCCAACC CGCAGGAAAT CCGTCAGGGC
CTGGAAGACA TCTGGGCCCA GGCTCAGGCG CGTGGGCGTC AACGTGAAGA CGTTAAATCG
CTGACGGTAT TGCGCATCGT CACGGCCAAA ACCGAAATCG AAGCCCAGCG CAAATACGAC
GAGCTGCAAA GCAACTATCA CTTGCAGGCA CAACTGGTCA GTTACGCCGG CGACACCGGC
ATCGACATCA GCCGCTACGC CGACAGCGAT GCGCTATCGA CGCACACCGA AGGCCTGACC
TCATACGTCA TGCGCCCCGA TGGCAGTGGC AAGCCGCTGA CGGCGGGTGA TGTGAAAAAG
CGCTTCGCCA GCGTTACCCG TGGCAGCGAC CTGATTCTCG TCGGAACACC GCAGCAAGTC
GCCGATCGCA TCGAAGAGCA CGCGCGAATT TCCGGCACCA GCGGCTACAT GCTCAACCCG
TTGATCAGCC CAGGCAGCCT TGAGGACTTT GTCGAACTGG TGATTCCCGA ACTGCAAAAG
CGTGGGCTGT ACCGGACTCA ACCGCAGAGT GGCACTTTCC GTTCGCGGTT GCGGGAAGAC
CGCTCCAGTC ACCTGCCTGA GTCGGCCTAT GGGGCTTCGT TCCGCTTCGA CTAG
 
Protein sequence
MSDPKPLLFA LYEQASVGCG GAPSLWTHPA DERLAINSLG YWSNLARIAD QAHLDMLFFG 
DVLGFYDVLG GNADAAVKWA VEAPANDPLM IIPALAAVTE NLAFGVTVTT SYEHPFTHAR
RFSTLDHLTN GRVGWNIVTS YLSSAARNFG LEQMIKHDDR YERAEEFLDV VYKLWEGSWA
DDAVVADKSR QLYARGERVR PINHEGAHYR VAGPHLTAPS PQRTPLLIQA GWSGRGREFA
AKHAELIFIA KSNPQEIRQG LEDIWAQAQA RGRQREDVKS LTVLRIVTAK TEIEAQRKYD
ELQSNYHLQA QLVSYAGDTG IDISRYADSD ALSTHTEGLT SYVMRPDGSG KPLTAGDVKK
RFASVTRGSD LILVGTPQQV ADRIEEHARI SGTSGYMLNP LISPGSLEDF VELVIPELQK
RGLYRTQPQS GTFRSRLRED RSSHLPESAY GASFRFD