Gene Pfl01_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2799 
Symbol 
ID3714540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3225356 
End bp3226087 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_348530 
Protein GI77459024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.726282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTC TTTCCAGCGA TGTTCGCCTG CCGCTTTACC AACGTTTGCG TGACCACCTC 
GCTGAGCAGA TTGCCAATAA TCGCTGGCGC CCGGGGGAGG CCATTCCCAC CGAAGCCGCG
CTTTCTGCGG AATACCAGCT GTCCACCGGT ACCGTGCGTA AAGCGGTCGA CGCGCTGGTC
AGTGAAGGCA TTCTGGAGCG TCAGCAAGGT CGAGGCACCT TCGTTCGCCG GCCTCAATTT
CAATCTTCGT TATTCCGTTT CTTCCGTTTT CAGACTGCTG CTGGTGAACG TCAGGTACCC
GAGAGTCGCA TCCTGTCGAT CGAACCGATG ATCGCGCCGT CGGCGGTGGC GCAGGCGCTA
GGACTGCCAC CTGACGCGCC GGTCATTCGC ATTGTCCGAG TACGTCTGCT CGATGTTCAG
CCGGTGCTCG CCGAAGAAAT CTGGCTGCCG CGCAGCCGCT TCCAGCCGCT GCTGGAGATT
GACTTGAGTC GCCAAGGGCC GCTGCTGTAT CCGATCTACG AAGAGGTTTG CGGTCAGGTC
GTCGCCTATG CCGAAGAAAC ACTCACCGCT GAATCAGTGA ATGAGGTGCA CGCGCGATTG
CTGCAAGTAC CGATCAGCAG CCCCGTGGTG GTGATCGAGC GTCTGGCGCG CGATTACGCG
GGTACGCCCC TGGAGTGGCG CCGCTCCCGA GGGCATGCCG AACACTTTCG CTACAGCGTG
GATATTCGCT AA
 
Protein sequence
MNSLSSDVRL PLYQRLRDHL AEQIANNRWR PGEAIPTEAA LSAEYQLSTG TVRKAVDALV 
SEGILERQQG RGTFVRRPQF QSSLFRFFRF QTAAGERQVP ESRILSIEPM IAPSAVAQAL
GLPPDAPVIR IVRVRLLDVQ PVLAEEIWLP RSRFQPLLEI DLSRQGPLLY PIYEEVCGQV
VAYAEETLTA ESVNEVHARL LQVPISSPVV VIERLARDYA GTPLEWRRSR GHAEHFRYSV
DIR