Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2799 |
Symbol | |
ID | 3714540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3225356 |
End bp | 3226087 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_348530 |
Protein GI | 77459024 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.726282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTCTC TTTCCAGCGA TGTTCGCCTG CCGCTTTACC AACGTTTGCG TGACCACCTC GCTGAGCAGA TTGCCAATAA TCGCTGGCGC CCGGGGGAGG CCATTCCCAC CGAAGCCGCG CTTTCTGCGG AATACCAGCT GTCCACCGGT ACCGTGCGTA AAGCGGTCGA CGCGCTGGTC AGTGAAGGCA TTCTGGAGCG TCAGCAAGGT CGAGGCACCT TCGTTCGCCG GCCTCAATTT CAATCTTCGT TATTCCGTTT CTTCCGTTTT CAGACTGCTG CTGGTGAACG TCAGGTACCC GAGAGTCGCA TCCTGTCGAT CGAACCGATG ATCGCGCCGT CGGCGGTGGC GCAGGCGCTA GGACTGCCAC CTGACGCGCC GGTCATTCGC ATTGTCCGAG TACGTCTGCT CGATGTTCAG CCGGTGCTCG CCGAAGAAAT CTGGCTGCCG CGCAGCCGCT TCCAGCCGCT GCTGGAGATT GACTTGAGTC GCCAAGGGCC GCTGCTGTAT CCGATCTACG AAGAGGTTTG CGGTCAGGTC GTCGCCTATG CCGAAGAAAC ACTCACCGCT GAATCAGTGA ATGAGGTGCA CGCGCGATTG CTGCAAGTAC CGATCAGCAG CCCCGTGGTG GTGATCGAGC GTCTGGCGCG CGATTACGCG GGTACGCCCC TGGAGTGGCG CCGCTCCCGA GGGCATGCCG AACACTTTCG CTACAGCGTG GATATTCGCT AA
|
Protein sequence | MNSLSSDVRL PLYQRLRDHL AEQIANNRWR PGEAIPTEAA LSAEYQLSTG TVRKAVDALV SEGILERQQG RGTFVRRPQF QSSLFRFFRF QTAAGERQVP ESRILSIEPM IAPSAVAQAL GLPPDAPVIR IVRVRLLDVQ PVLAEEIWLP RSRFQPLLEI DLSRQGPLLY PIYEEVCGQV VAYAEETLTA ESVNEVHARL LQVPISSPVV VIERLARDYA GTPLEWRRSR GHAEHFRYSV DIR
|
| |