| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2781 |
|---|
| Symbol | |
|---|
| ID | 3714522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3205029 |
|---|
| End bp | 3207125 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | glycine betaine/L-proline ABC transporter, ATPase/permease fusion protein, putative |
|---|
| Protein accession | YP_348512 |
|---|
| Protein GI | 77459006 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACTTA TTCAAACCTC TTTGGCAACG GTACAGATCG ACTTGCCTGA ACGATTGGCC
CCACCCATCG ACGATAGCGC CGAGGAGGGC GATGTTGTCC TCGAACTGCG AGGCGTCACT
AAAGCTTATC TGCGCAAAGG CGGATCGCCG TTGCCGGCTG TCAACCATGT CAGCTTGAAG
GTTCGACGCG GCGAAGTGCT GTGCCTGATG GGCACCTCCG GCAGCGGCAA ATCGACCTTG
CTTCGCCATA TCAATCGTTT GATCGAACCC ACCAGCGGTG AGGTCTTGAT TGAAGGTCAG
GCTATCAGCG GCCTGAGCCA CAAAGCGTTG CGGGATTTGC GCTCGCGTCG AATCGGCATG
GTGTTCCAGC ATTTTGGTCT TTTGCCCCAT CGCACGGTGC TGGACAACGT TGCGCTGCCT
CTGGAGTTGC GCGGCGAATC CGAGGCCGTC CGGCACGCAG CGGCCACCCG ACAGTTACAG
GCGATGGGCC TGGAGGGATG GGGCGAGCAT TATCCCCACG AGTTGTCCGG CGGTATGCAG
CAACGGGTCG GACTTGCGCG GGCATTGGTG ACTGATCCGG ATATTCTCCT GATGGACGAG
CCTTTCAGCG CACTGGATCC GACCATCCGG CGAGACCTGC AAAGCCACTT TCTGGCCTTG
GTACGCGAGC GCGGGATCAC CACGTTGCTG GTCACCCACG ATCCTGCCGA AGCGGTACGC
CTCGCTGACC GGATAGCGGT ATTGCGCCAG GGACGTCTGG TGCAGTCGGG CACCCCGAAA
CAGCTGCTCG AGACGCCGGC CGATGCTGAG GTCGCGGATT TTTTCCGCGA TTGCCTTCCA
GCCGCACCGG TATTGCACGA TGCCGGTGGC GCGGTACGTC AGGTTCCCGA AACGGCACCG
AAGGAGCAAC CGGTTCAGCC GGGCTTGCGC GGCTGGCAAG CCCTGTTGCT CGGGCCGGCA
GCGCTGGCGG CGCGGGGCCG AGGCGGGTTG TTCTGGCTCG GGTTCGCCGC AGAACTCGCG
GCCCTGGCCA CTGCGGTGCA GGGCATTACG AGCGCATCCT GGATATCGGT CGTGGTGGGA
TTGGCCGTGC TGGCGGCCAG TCGTTTCACC GCGTATTCAC TGGGCCGTCA ACCGGTGCGG
CGCGCCGTTT CGAGTTGGAC GTTGCCGCTG GCGGTGCTGC TGGTCAGTCA GGCATTGGTG
ATCTGGCGGG TGTTGACGCC CGATACCACC CAGGCGCTTT TGCAGTTCCC GGCCAGCCGC
CAGGCGCTAT TACTGACTGC ACAGAGTGTG GATGACTTTA TCGGTTGGTC ACAGGTGACG
TTCGAGAGCG CTTTTGTCGG CGTGATCGTT GCGGTTCGCA CGGTCATTGA AGGAATCGAA
TCCCTGCTCG GTTGGCTGCC CTGGCCGGTT TGCGCGCTGG CGCTGGTATT GCTGGCATGG
CGCTCGGCGG GCCTGGCCCT GGCGCTCACC AGCAGCGCAG CGTTGTTGTA TATCGGCCTG
TTCGGGTTTT GGGAGCGGAC AATTGCCACG CTGGCGCTGG TTGGTTCGTC GGTGCTGATC
GCACTGGTCA TCGGCGTACC CACCGGCATT CTGCTGGCGA AGCGGCCATT TGCCCGCAGG
CTGCTCACGC CTTTGCTGGA TGTCATGCAG ACCCTGCCGA CCTTTGTCTA TCTGATTCCC
GCTGTGGCGT TCTTTTCGGT AGGCAAGACC CCGGCGGTCA TTGCGACGGT GATTTTTGCC
CTGGCACCGA TGATTCGTCT GACGTCCCTG GGTATTCAGG AAGTCCCGAA GGATGCCGTG
GAAGCGGCAA TCGCCCATGG AGCGAACCCT TGGCAAACCC TGGTGAAGGT GCAACTGCCG
CTGGCGCGAA GATCCCTGTT GCTGGGGATC AATCAGACCA TTGTCATGAG CCTGTCGATG
GTGGTGGTTG CTGCCCTGAT CGGCGCTGGA GGACTGGGTT ACGACGTCAT GACGGCGTTG
CGCAATATCA AGGGCGGCGA GGGCGTGCTG GCCGGCGTGG CGATCGTGCT GTGTGCATTG
ATCCCCGATC GAATCATTCA ATCGAGCTTG CGCAAGCAAG ACCATCTGCA TAACTGA
|
|---|
| Protein sequence | MTLIQTSLAT VQIDLPERLA PPIDDSAEEG DVVLELRGVT KAYLRKGGSP LPAVNHVSLK
VRRGEVLCLM GTSGSGKSTL LRHINRLIEP TSGEVLIEGQ AISGLSHKAL RDLRSRRIGM
VFQHFGLLPH RTVLDNVALP LELRGESEAV RHAAATRQLQ AMGLEGWGEH YPHELSGGMQ
QRVGLARALV TDPDILLMDE PFSALDPTIR RDLQSHFLAL VRERGITTLL VTHDPAEAVR
LADRIAVLRQ GRLVQSGTPK QLLETPADAE VADFFRDCLP AAPVLHDAGG AVRQVPETAP
KEQPVQPGLR GWQALLLGPA ALAARGRGGL FWLGFAAELA ALATAVQGIT SASWISVVVG
LAVLAASRFT AYSLGRQPVR RAVSSWTLPL AVLLVSQALV IWRVLTPDTT QALLQFPASR
QALLLTAQSV DDFIGWSQVT FESAFVGVIV AVRTVIEGIE SLLGWLPWPV CALALVLLAW
RSAGLALALT SSAALLYIGL FGFWERTIAT LALVGSSVLI ALVIGVPTGI LLAKRPFARR
LLTPLLDVMQ TLPTFVYLIP AVAFFSVGKT PAVIATVIFA LAPMIRLTSL GIQEVPKDAV
EAAIAHGANP WQTLVKVQLP LARRSLLLGI NQTIVMSLSM VVVAALIGAG GLGYDVMTAL
RNIKGGEGVL AGVAIVLCAL IPDRIIQSSL RKQDHLHN
|
|---|
| |