Gene Pfl01_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2774 
Symbol 
ID3714515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3199524 
End bp3200693 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_348505 
Protein GI77458999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG TAGACATCCG CGAAAAAACT GTTTCTATCG CTTCTCCCAT TGCCAATGCC 
TACATTGATT TTTCGAAAAT GACCTGCTCG GTCGTTGCTG TTGTCACGGA TGTGATTCGC
GATGGTAAAC CTGTCATTGG CTACGGCTTC AACTCCAACG GTCGCTATGG TCAAGGCGCG
TTGATGCGTG ATCGCTTCCT GGCGCGAATC ATGGAAGCTG ATCCGGATAC TCTTATCGAC
CATGAGAACA ACAACCTGGA TCCGTTCGCC ATCTGGAAGA CCCTGATGAC CAACGAAAAG
CCAGGTGGTC ACGGCGAACG TTCAGTTGCA GTCGGCACCA TTGATATGGC CGTGTGGGAT
GCCGTTGCCA AGATCGAAGG CAAGCCTCTC TATCGTCTGC TGGCTGATCG GTACCGTAAC
GGCGTGGCCG ATGAAAAAGT CTGGGTCTAC GCAGCAGGTG GCTACTACTA CCCAGGCAAA
GACCAGACCA AACTCAAAGC AGAAATGCAG AGCTACCTGG ATCGTGGCTA CGACGTTGTC
AAAATGAAGA TCGGTGCAGT GCCACTGGAC GAAGATATTC GTCGCATCGA AGCGGTACTC
GAAGTGGTTG GGGACGGTCG TCGACTGGCG GTCGATGCCA ACGGTCGCTT CGATCTTCAG
ACCGGTATTG CTTATGCGGA AGCCTTCAAG AAGTACAACC TCTTCTGGTA CGAAGAAATC
GGCGACCCGC TGGACTATGC ACTCCAGGCT GAGCTTGCCA ATCACTACGA GCTGCCGATG
GCTACCGGGG AAAACCTGTT CTCCCATCAG GACGCTCGTA ACCTTCTGCG CCACGGTGGC
ATGCGCCCTG ATCGCGACTT TCTGCAGTTC GACTGCGCGC TGTCTTACGG ACTCGTTGAG
TACATGCGCA CCCTGAAAGT GATGGACGAA ATGGGATGGT CTTCCCGTCG CGTGGTTCCG
CACGGCGGCC ACCAGATGTC CCTCAATATC GCAGCAGGCC TGCACTTGGG TGGCAACGAG
TCTTACCCCG ATGTGTTCCA GCCTTTCGGC GGCTTCGCTG ACGGAATCAA GGTGGAAAAT
GGTTATGTCG GTCTGCCTGA TATTCCAGGT GTTGGCTTCG AAGCCAAATC CGCTTTGTAC
GCAGTCATGC GTGAGCTAGG CGAAGGCTGA
 
Protein sequence
MRIVDIREKT VSIASPIANA YIDFSKMTCS VVAVVTDVIR DGKPVIGYGF NSNGRYGQGA 
LMRDRFLARI MEADPDTLID HENNNLDPFA IWKTLMTNEK PGGHGERSVA VGTIDMAVWD
AVAKIEGKPL YRLLADRYRN GVADEKVWVY AAGGYYYPGK DQTKLKAEMQ SYLDRGYDVV
KMKIGAVPLD EDIRRIEAVL EVVGDGRRLA VDANGRFDLQ TGIAYAEAFK KYNLFWYEEI
GDPLDYALQA ELANHYELPM ATGENLFSHQ DARNLLRHGG MRPDRDFLQF DCALSYGLVE
YMRTLKVMDE MGWSSRRVVP HGGHQMSLNI AAGLHLGGNE SYPDVFQPFG GFADGIKVEN
GYVGLPDIPG VGFEAKSALY AVMRELGEG