Gene Pfl01_2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2771 
Symbol 
ID3714512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3196142 
End bp3197107 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content52% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_348502 
Protein GI77458996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CAATCTTGGC CTTCAGCCGG GTCTCCCCCA GCCTGCTTGA ACCTTACAAA 
GACGACTACG AAGTCATCAT CATTAGTCCT GAGCTTGGTG ATATGGACGC CCAGTTCGAG
GCCGCTATTT CGAACGCTCA CGGGCTGATT GGTGGAAGTC GTCGTCTGGG TGAAGCTGAG
CTGGCTGCGG CTGTAAATCT TGAGATCGTC TCAAGCATAT CGGTTGGCTA CGACAACTAT
GACCTCGACT ACCTCAACCG CCGAGGGATC ATGTTGACGA ATACGCCAGA TGTGTTGAAC
GAAACCACTG CTGACCTGGC TTTGGCCCTG ATCCTCGCCA CAGCAAGACG CATTCCTGAG
CTTGATTCCT GGACTAAAGA GGGTAACTGG ACACAAACCA TCGATGCATC CCAATTTGGG
TGCGACGTTC ATGGAAAGAC GTTGGGCATT ATCGGTCTGG GAAAAATCGG AGAAGCCATC
GCACGCAGAG GCCGCTTTGG TTTTGGCATG ACCATTTTGT ATAGCGGCAA CAGTCGTAAA
CCAAAGCTTG AACAGGAACT TGGTGCGAGG TTTGTACCGC AGGAAGAGCT TTTAAGCGCG
TCTGACTTTG TTTGTCCGGT CGTGCCATTG ACGGACGCCA CGAGGAATCT TATCGGACGC
AAAGAACTCG CTTTGATGGG CCCGGAAAGT ATTTTGATCA ATATCTCGCG TGGGCCTGTC
GTGGATCAGG ACGCACTCAT CGAGGCTCTG CAAGAAAAGA CAATCCGGGC GGCTGGTTTG
GACGTTTATG TGAAGGAGCC CCTGACGAAC TCCGAGCTTT TTAACCTGAG AAACGTCGTC
ACCGTACCTC ACATTGGCTC TGCGACGACT GACACCCGCA ACGCAATGGC CAAGCGAGCC
CTGGAAAATT TGCTTGCGGG TCTGGAAGGT CGCCAGCCGA GAGATCTTGT GCACTTCAAG
AAGTAA
 
Protein sequence
MKKTILAFSR VSPSLLEPYK DDYEVIIISP ELGDMDAQFE AAISNAHGLI GGSRRLGEAE 
LAAAVNLEIV SSISVGYDNY DLDYLNRRGI MLTNTPDVLN ETTADLALAL ILATARRIPE
LDSWTKEGNW TQTIDASQFG CDVHGKTLGI IGLGKIGEAI ARRGRFGFGM TILYSGNSRK
PKLEQELGAR FVPQEELLSA SDFVCPVVPL TDATRNLIGR KELALMGPES ILINISRGPV
VDQDALIEAL QEKTIRAAGL DVYVKEPLTN SELFNLRNVV TVPHIGSATT DTRNAMAKRA
LENLLAGLEG RQPRDLVHFK K