Gene Pfl01_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2762 
Symbol 
ID3714503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3188399 
End bp3189520 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content52% 
IMG OID 
ProductGAF sensor Signal transduction histidine kinase 
Protein accessionYP_348493 
Protein GI77458987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC ACGTCACTGG AATGCGGTTC GCCGCTGTCG CCAGGGTCAC TGAAAAAAAC 
TGGGTGGCGT GCGCAGTAGA TGACTCCATT GAGTTCGGCT TGAAACCTGG CGACGAGCTG
GTGCTTGAGT CAACGATCTG CCATGAAATT CGGCAGCACA GAAAACCGGT CATTTTTGGC
CACGCCAGTG AACATCCCGT TTTTTCCCTG CATCACACGC CCAGTACCTA TGGATTGGAA
AGCTATATTT CTATTCCGAT CATAAAGGCA AACGGCGAGT TTTTTGGGAC ACTGTGTGCC
ATCGACTCTG TGCCTGCTCA TCTCGATGAC CCGGCCATTG CCAACACACT TACGCTTTTC
GCCCAATTGA TAGCGTTGAG CCTCGATGCC CAGAATAATC TCGAGATTGC CCAAGCGGAG
TTAGTTAATG CCCAGGAGCA CGGAAGGTTG CGCGAGCAAT TCGTCGCCGT ACTCGGGCAT
GATCTGCGCA CGCCATTGAG CGCCATTCGT ATGAGCGCCG ATCTGCTGGA AACCAAAACA
ACGGACAAAA GATCGCTTAG CTTAATTTCA GCCATTCGTA CTAGCTCCAC ACGCATGGGA
AACCTGATCG AAAACGTGCT GGATTTTGCA CGGGGTCGAA TGGGGAGCGG AATTCCAATC
AAACGCCAAC TTGTCGATGA TCTGGGCAAC ACACTACGTT TGACTCTGAA TGAGGTTCAA
ATCTCGCACC CTCGAGCTAC ATTTATTGAG TTGGTAGACA TACCGGCCGG TGTCTATTGT
GACCCTCTGC GTATCAGCCA GTTGCTTTCC AACTTGTTGG GAAACGCAGT CACCCACGGC
TCATTAGCGT CGCCTATCAC TGTTAAGGCC GACACTGAAG TGGACGAAAT TGTTATATCT
GTGACCAACC AAGGCCCCCC GATACCGCCG CACTTGTCGC CCTTGCTGTT TGAACCTTTC
ACCCGATCGG AGGCTGGACA ACGTGGTGAA GGCTTGGGCT TGGGACTCTA TATCGCCTCC
CAAATTACCA CTGCGCACGG AGGCAACCTG AGCGTGGTGT CCACACTCGA ATCGGGAACT
TGTTTCGTAG CAAGATTTCC CGCTCGTCTT AAATGTGCCT AA
 
Protein sequence
MVKHVTGMRF AAVARVTEKN WVACAVDDSI EFGLKPGDEL VLESTICHEI RQHRKPVIFG 
HASEHPVFSL HHTPSTYGLE SYISIPIIKA NGEFFGTLCA IDSVPAHLDD PAIANTLTLF
AQLIALSLDA QNNLEIAQAE LVNAQEHGRL REQFVAVLGH DLRTPLSAIR MSADLLETKT
TDKRSLSLIS AIRTSSTRMG NLIENVLDFA RGRMGSGIPI KRQLVDDLGN TLRLTLNEVQ
ISHPRATFIE LVDIPAGVYC DPLRISQLLS NLLGNAVTHG SLASPITVKA DTEVDEIVIS
VTNQGPPIPP HLSPLLFEPF TRSEAGQRGE GLGLGLYIAS QITTAHGGNL SVVSTLESGT
CFVARFPARL KCA