Gene Pfl01_2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2747 
Symbol 
ID3714488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3165875 
End bp3167158 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content61% 
IMG OID 
ProductAcyl-CoA dehydrogenase-like 
Protein accessionYP_348478 
Protein GI77458972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000477643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGC TCAAGTCGAC ACTTACCCTG CCAGCCGCCG GACTCTCCGG ATTCGAAACA 
CCGCTGACAG AAGAGGAGGC TGCAATACAG GCCTCCGTCC ACCGCTTCGC CAAAGAGGTG
TTACGCCCGC TGGGTCGAGA GCTGGACCGG ATGACCCCGG AAGAAGTCGT TGCCCCGGGC
TCGCCTTACT ATTCGTTGTT CGGCGAATTC GCCAAGCTCG GTCTTGACCC GGCACTGTTG
GCGCAGTTAC CGCCGGAAAT GGCAGTGCGG ATCGAATCTC TGATAGGCGA AGAACTCGGC
TGGGGCGATG CAGGCCTGGC TGTCTCGCTG GGTTGCGCCG ACTTCCCTCT GCAAATGGCC
ATCGCCGCTG GCAATGCCGA GTTGGTCGAA CTCTGCCAAG GCCGGATCGG CTGCTGGATG
GCCACTCAAC CTGATCGTGG CAGCGACAAC CAGATCTTCG ACATGGCGCG AGACTGGCCG
GCAGGTAAGC TCGGCAATAT CGGCAATCTG ACCGCTAAAG TGGTCGGCGA TGAAGTCATC
CTCAATGGCC AAAGCTCCGC GTGGGTCTCC AACGGAGCCA TTGCACAGGT TGCACTGGGC
TTGATGTGCG CTGATTACGG CGACGGTTTC TACGATGAGA ACGGCCGGCC GCACGGTATT
GCGCTGATTA TCCCCCTCGA CCTCAAAGGT GTGTCCAAAG GCAAGCCCCT GGACAAGATC
GGGCAGCGTT CCTTGCCCCA AGGCGAAATC TACTTCGACA GTGTACGAGT GCCACGTCGC
TTCGCTATTG CCGAGCGCGA CCAGTACTAC GGTGCTGTCA GCTCCTCCTG GTCCTTCGCC
GGCACCCACA TGAGTCAGGT GTTCACCGGT GTCGCACGTG CCGCCTTCGA GATGGCGCTG
CAGTACTGCC ATGAGCGCCG CCAGGGCGGT CATCCATTGA TCGATCACCA GATGACCCGT
CTGCGCCTCG GCGAAATGTT GCGTCGGGTC GAGGCAGCGC GTGCGGTTGC CCGACGTTCG
TTGAGCTTCG CGCGCCTGTC GCCGCAAACC CACCCGTACG CCACAGCCTC CGCCAAGGTC
ACGGTGACCG AAGAGGCAAT GGCCGTTGTG CAAGAGGCTT TCCGCCTGTT CGGCGGCAAT
GGCACCACGC GCGAATACCC GATCGAAAAA CTGCTGCGCG ACACCCAGTC GTCATTGATC
GAGGACGGCG AAAACCGGGT CCTGACCATG CGACTGGGGC TGCTTGCCCA GCAGCTGTAT
GCCGAAGGCT GGGCGAACAA CTGA
 
Protein sequence
MISLKSTLTL PAAGLSGFET PLTEEEAAIQ ASVHRFAKEV LRPLGRELDR MTPEEVVAPG 
SPYYSLFGEF AKLGLDPALL AQLPPEMAVR IESLIGEELG WGDAGLAVSL GCADFPLQMA
IAAGNAELVE LCQGRIGCWM ATQPDRGSDN QIFDMARDWP AGKLGNIGNL TAKVVGDEVI
LNGQSSAWVS NGAIAQVALG LMCADYGDGF YDENGRPHGI ALIIPLDLKG VSKGKPLDKI
GQRSLPQGEI YFDSVRVPRR FAIAERDQYY GAVSSSWSFA GTHMSQVFTG VARAAFEMAL
QYCHERRQGG HPLIDHQMTR LRLGEMLRRV EAARAVARRS LSFARLSPQT HPYATASAKV
TVTEEAMAVV QEAFRLFGGN GTTREYPIEK LLRDTQSSLI EDGENRVLTM RLGLLAQQLY
AEGWANN