Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2747 |
Symbol | |
ID | 3714488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3165875 |
End bp | 3167158 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Acyl-CoA dehydrogenase-like |
Protein accession | YP_348478 |
Protein GI | 77458972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000477643 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCGC TCAAGTCGAC ACTTACCCTG CCAGCCGCCG GACTCTCCGG ATTCGAAACA CCGCTGACAG AAGAGGAGGC TGCAATACAG GCCTCCGTCC ACCGCTTCGC CAAAGAGGTG TTACGCCCGC TGGGTCGAGA GCTGGACCGG ATGACCCCGG AAGAAGTCGT TGCCCCGGGC TCGCCTTACT ATTCGTTGTT CGGCGAATTC GCCAAGCTCG GTCTTGACCC GGCACTGTTG GCGCAGTTAC CGCCGGAAAT GGCAGTGCGG ATCGAATCTC TGATAGGCGA AGAACTCGGC TGGGGCGATG CAGGCCTGGC TGTCTCGCTG GGTTGCGCCG ACTTCCCTCT GCAAATGGCC ATCGCCGCTG GCAATGCCGA GTTGGTCGAA CTCTGCCAAG GCCGGATCGG CTGCTGGATG GCCACTCAAC CTGATCGTGG CAGCGACAAC CAGATCTTCG ACATGGCGCG AGACTGGCCG GCAGGTAAGC TCGGCAATAT CGGCAATCTG ACCGCTAAAG TGGTCGGCGA TGAAGTCATC CTCAATGGCC AAAGCTCCGC GTGGGTCTCC AACGGAGCCA TTGCACAGGT TGCACTGGGC TTGATGTGCG CTGATTACGG CGACGGTTTC TACGATGAGA ACGGCCGGCC GCACGGTATT GCGCTGATTA TCCCCCTCGA CCTCAAAGGT GTGTCCAAAG GCAAGCCCCT GGACAAGATC GGGCAGCGTT CCTTGCCCCA AGGCGAAATC TACTTCGACA GTGTACGAGT GCCACGTCGC TTCGCTATTG CCGAGCGCGA CCAGTACTAC GGTGCTGTCA GCTCCTCCTG GTCCTTCGCC GGCACCCACA TGAGTCAGGT GTTCACCGGT GTCGCACGTG CCGCCTTCGA GATGGCGCTG CAGTACTGCC ATGAGCGCCG CCAGGGCGGT CATCCATTGA TCGATCACCA GATGACCCGT CTGCGCCTCG GCGAAATGTT GCGTCGGGTC GAGGCAGCGC GTGCGGTTGC CCGACGTTCG TTGAGCTTCG CGCGCCTGTC GCCGCAAACC CACCCGTACG CCACAGCCTC CGCCAAGGTC ACGGTGACCG AAGAGGCAAT GGCCGTTGTG CAAGAGGCTT TCCGCCTGTT CGGCGGCAAT GGCACCACGC GCGAATACCC GATCGAAAAA CTGCTGCGCG ACACCCAGTC GTCATTGATC GAGGACGGCG AAAACCGGGT CCTGACCATG CGACTGGGGC TGCTTGCCCA GCAGCTGTAT GCCGAAGGCT GGGCGAACAA CTGA
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Protein sequence | MISLKSTLTL PAAGLSGFET PLTEEEAAIQ ASVHRFAKEV LRPLGRELDR MTPEEVVAPG SPYYSLFGEF AKLGLDPALL AQLPPEMAVR IESLIGEELG WGDAGLAVSL GCADFPLQMA IAAGNAELVE LCQGRIGCWM ATQPDRGSDN QIFDMARDWP AGKLGNIGNL TAKVVGDEVI LNGQSSAWVS NGAIAQVALG LMCADYGDGF YDENGRPHGI ALIIPLDLKG VSKGKPLDKI GQRSLPQGEI YFDSVRVPRR FAIAERDQYY GAVSSSWSFA GTHMSQVFTG VARAAFEMAL QYCHERRQGG HPLIDHQMTR LRLGEMLRRV EAARAVARRS LSFARLSPQT HPYATASAKV TVTEEAMAVV QEAFRLFGGN GTTREYPIEK LLRDTQSSLI EDGENRVLTM RLGLLAQQLY AEGWANN
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