Gene Pfl01_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2744 
Symbol 
ID3714485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3161863 
End bp3163101 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content61% 
IMG OID 
Productthiolase 
Protein accessionYP_348475 
Protein GI77458969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00569153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTA TTTACATCGC CGGCATTGCC ATGACCGAGT TCGGTCGCCA CCTGGAACGC 
AGTCTCCAGG ATTTAGCGCT GGAAGCTTTG CAGGGCGCAC TCGCCGACTC CGGCGCCTTG
CGCGCTGATA TCGGTGCGGT GTTCTACGCC GGCATCACCA ACGGTCATCT GCAAGGACAA
CTGTCGATTC CCGGGCAGGT GCTGTGCAGC AAGATCGGCC TCGAAGGGGT GCCGGTGTAC
AACGTCGAAA ACGCCTGCGC CTCGGGCAGT ACAGCGGTTC ATCTGGCAGT GCAGAGCTTG
CGCTCAGGGG CTACCGACGT GGCCCTGGCG TTGGGCGCGG AGAAAATGAA CGTGCCGGAC
AAGTCGCGGG CACTGGCCCT GTTCGAAACC GGTTGGGACG TTTCCACTGC CGAAGAGAAC
TACGCGACGC TGGTGAAAAT GGGGGAGGGC ATCATTGTTC CGCCAGGCTC GGAATCTGAT
CGTCCGTACA GTAAATTCAT GGCCATTTAT GCTGCCATGT GTCGCTGGCA TATGAAGACC
TATGGCACCA CTCAACGGCA GATTGCGGCG GTGTGTGCCA AGAACCATCA ACACTCGGTG
CACAACCCCT ATTCGCAATT TCGCAAGACC TTCAGCATCG AAGAAGTTCT GGCGGCGCCT
CCAATTACCT ATCCGATCAC ATTGCCCATG TGCGCGCCGC TGTCCGACGG TGCGGCCGCC
GCGATCCTTT GCACCGAGGC GGGACTGAAA CGCATTGGTG CCGATCCAAA ACGTTGTGTG
CGAATCGCCG CCAGCGTGAT CCGCAGCTTC ACCCTGCGCG GGCTCGACGA GCCGCACAAG
CACGTCAGCC TGTTGGCGGC GCGTGAAGCC TACGAAATCG CCGGCCTCGG CCCGCAGGAC
ATGCACGTGG CCGAGGTACA CGACGCCTCG GCAATGGGGG AAATCATCCA GTCGGAAAAT
CTCGGACTTG CACCGCTGGG AGAGGGTGGG GTTTGTGCAG AACGGGGAGA TTTCACTCTA
GGTGGCCGTC TTCCGATCAA TACCTCCGGC GGCCTGGAAT CCAAAGGTCA TCCACTTGGC
GCGACGGGGA TCGGGCAGTT GTACGAGTTG GTCACCCAAT TGCGCGGGGA GGCCGGGCCG
CGTCAAGTCC ACGGCGCGCG GCATGCCATC CAGGAAAACG GTGGCGGTCT TCAAGGTGTC
GAGGAAGCAG CAGTCGCTAT TCACATCCTG AGTCGATAG
 
Protein sequence
MEPIYIAGIA MTEFGRHLER SLQDLALEAL QGALADSGAL RADIGAVFYA GITNGHLQGQ 
LSIPGQVLCS KIGLEGVPVY NVENACASGS TAVHLAVQSL RSGATDVALA LGAEKMNVPD
KSRALALFET GWDVSTAEEN YATLVKMGEG IIVPPGSESD RPYSKFMAIY AAMCRWHMKT
YGTTQRQIAA VCAKNHQHSV HNPYSQFRKT FSIEEVLAAP PITYPITLPM CAPLSDGAAA
AILCTEAGLK RIGADPKRCV RIAASVIRSF TLRGLDEPHK HVSLLAAREA YEIAGLGPQD
MHVAEVHDAS AMGEIIQSEN LGLAPLGEGG VCAERGDFTL GGRLPINTSG GLESKGHPLG
ATGIGQLYEL VTQLRGEAGP RQVHGARHAI QENGGGLQGV EEAAVAIHIL SR