Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2744 |
Symbol | |
ID | 3714485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3161863 |
End bp | 3163101 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | thiolase |
Protein accession | YP_348475 |
Protein GI | 77458969 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00569153 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCTA TTTACATCGC CGGCATTGCC ATGACCGAGT TCGGTCGCCA CCTGGAACGC AGTCTCCAGG ATTTAGCGCT GGAAGCTTTG CAGGGCGCAC TCGCCGACTC CGGCGCCTTG CGCGCTGATA TCGGTGCGGT GTTCTACGCC GGCATCACCA ACGGTCATCT GCAAGGACAA CTGTCGATTC CCGGGCAGGT GCTGTGCAGC AAGATCGGCC TCGAAGGGGT GCCGGTGTAC AACGTCGAAA ACGCCTGCGC CTCGGGCAGT ACAGCGGTTC ATCTGGCAGT GCAGAGCTTG CGCTCAGGGG CTACCGACGT GGCCCTGGCG TTGGGCGCGG AGAAAATGAA CGTGCCGGAC AAGTCGCGGG CACTGGCCCT GTTCGAAACC GGTTGGGACG TTTCCACTGC CGAAGAGAAC TACGCGACGC TGGTGAAAAT GGGGGAGGGC ATCATTGTTC CGCCAGGCTC GGAATCTGAT CGTCCGTACA GTAAATTCAT GGCCATTTAT GCTGCCATGT GTCGCTGGCA TATGAAGACC TATGGCACCA CTCAACGGCA GATTGCGGCG GTGTGTGCCA AGAACCATCA ACACTCGGTG CACAACCCCT ATTCGCAATT TCGCAAGACC TTCAGCATCG AAGAAGTTCT GGCGGCGCCT CCAATTACCT ATCCGATCAC ATTGCCCATG TGCGCGCCGC TGTCCGACGG TGCGGCCGCC GCGATCCTTT GCACCGAGGC GGGACTGAAA CGCATTGGTG CCGATCCAAA ACGTTGTGTG CGAATCGCCG CCAGCGTGAT CCGCAGCTTC ACCCTGCGCG GGCTCGACGA GCCGCACAAG CACGTCAGCC TGTTGGCGGC GCGTGAAGCC TACGAAATCG CCGGCCTCGG CCCGCAGGAC ATGCACGTGG CCGAGGTACA CGACGCCTCG GCAATGGGGG AAATCATCCA GTCGGAAAAT CTCGGACTTG CACCGCTGGG AGAGGGTGGG GTTTGTGCAG AACGGGGAGA TTTCACTCTA GGTGGCCGTC TTCCGATCAA TACCTCCGGC GGCCTGGAAT CCAAAGGTCA TCCACTTGGC GCGACGGGGA TCGGGCAGTT GTACGAGTTG GTCACCCAAT TGCGCGGGGA GGCCGGGCCG CGTCAAGTCC ACGGCGCGCG GCATGCCATC CAGGAAAACG GTGGCGGTCT TCAAGGTGTC GAGGAAGCAG CAGTCGCTAT TCACATCCTG AGTCGATAG
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Protein sequence | MEPIYIAGIA MTEFGRHLER SLQDLALEAL QGALADSGAL RADIGAVFYA GITNGHLQGQ LSIPGQVLCS KIGLEGVPVY NVENACASGS TAVHLAVQSL RSGATDVALA LGAEKMNVPD KSRALALFET GWDVSTAEEN YATLVKMGEG IIVPPGSESD RPYSKFMAIY AAMCRWHMKT YGTTQRQIAA VCAKNHQHSV HNPYSQFRKT FSIEEVLAAP PITYPITLPM CAPLSDGAAA AILCTEAGLK RIGADPKRCV RIAASVIRSF TLRGLDEPHK HVSLLAAREA YEIAGLGPQD MHVAEVHDAS AMGEIIQSEN LGLAPLGEGG VCAERGDFTL GGRLPINTSG GLESKGHPLG ATGIGQLYEL VTQLRGEAGP RQVHGARHAI QENGGGLQGV EEAAVAIHIL SR
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